Gene Tpen_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0366 
Symbol 
ID4601495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp333601 
End bp334065 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content48% 
IMG OID639773127 
ProductAsnC family transcriptional regulator 
Protein accessionYP_919778 
Protein GI119719283 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.552602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACG AGGGCTTGAC TGAAAAACAG GTAGAGCTGA TTAGACACCT GTTTAGAAGA 
AGCAAACCTC TACGAGTGTT TACAGTGACG GATACTCAGC AGAAGATCTC GCTTGAACTG
GGTATTTCGC GTCAAGCGCT AAACATCCAT CTGAAGAAGC TTAAGGAGGC GGGCTATATC
CGCACCGGTA GAGGGTTCCT GGATTTAACG GAGAAAGTTC TACCGATAGT TGGGAAGCAG
GCCGGGGATA CCTTCATCTT CGTAAAGCTA CACCCCACGA AGAGGCTACA GGCTTACGAG
ATAATTAAGA CGTTGCCCGT GGATAGAGTC TACAGAGTTA CGGGAGACAT AGACCTGATA
ATACAGGCTT CGCAGGCTAT GCTCGACGAG ATCTTGGACA AGATAAACTC CATCGAAGGG
GTAAAGGAGA CTAAGACCTA CGTAATTATC GAGGCTTTAA AGTAG
 
Protein sequence
MSHEGLTEKQ VELIRHLFRR SKPLRVFTVT DTQQKISLEL GISRQALNIH LKKLKEAGYI 
RTGRGFLDLT EKVLPIVGKQ AGDTFIFVKL HPTKRLQAYE IIKTLPVDRV YRVTGDIDLI
IQASQAMLDE ILDKINSIEG VKETKTYVII EALK