| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0340 |
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| Symbol | |
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| ID | 4601707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 310960 |
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| End bp | 311562 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773100 |
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| Product | V-type ATPase, D subunit |
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| Protein accession | YP_919752 |
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| Protein GI | 119719257 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
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| TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.834383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCTAC AGGAGCTTGC TTTCTTACCC GCCTCGAGGG GTACTCTACA GTACCTGAGG
CGGAAGCTCG ACCTTGTAAA GAGGGGGAAG AACGTTCTAC AGATGCGGCG CGACCAACTA
GCAAAGGAGC TTCTCGCAAT AATGGACGAG TTGAAGAAGA GACCCGAGGC AGAGAAGCAA
TTCATCGAGG CGGCTAGGAC AGCGGCGCTC ATGAGGATGT CTAGGGGGGA GTACGAGTTC
AGGTCGATGT CCTCGCTCGT AAAGCCCCCG AAAATAACGC ATGTTTTAGT AAGCTATCAA
GGGGTGCCTG TTCCCCAAGC CAGGGTACAG GAAGAGCCCG ACTGGTCGAA GCTACTGGAT
CCCGATTACC GCAGGGTAGT AGAAACCCTA TGGAACGCCG TGAAGACTAT GATCGACGTT
GCCAACAAGG AGGTCGCCGT TGAGAAGATA AGCGATCAAC TACTCTACAT TAACAGGGTC
GTTAATAGCC TGGAAAAGAA CGTGATACCC CAGCTAGAGT CTGCTCTTAG ACGCGTGGAG
GAACGCGTAG TCGACGAAGA ACTAGAGGAC TTTGTGCGGG TAAAGCTACT AGGGGGGAGG
TAG
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| Protein sequence | MALQELAFLP ASRGTLQYLR RKLDLVKRGK NVLQMRRDQL AKELLAIMDE LKKRPEAEKQ
FIEAARTAAL MRMSRGEYEF RSMSSLVKPP KITHVLVSYQ GVPVPQARVQ EEPDWSKLLD
PDYRRVVETL WNAVKTMIDV ANKEVAVEKI SDQLLYINRV VNSLEKNVIP QLESALRRVE
ERVVDEELED FVRVKLLGGR
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