| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0336 |
|---|
| Symbol | |
|---|
| ID | 4601703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 305104 |
|---|
| End bp | 306630 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639773096 |
|---|
| Product | CoA-binding domain-containing protein |
|---|
| Protein accession | YP_919748 |
|---|
| Protein GI | 119719253 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | [TIGR02717] acetyl coenzyme A synthetase (ADP forming), alpha domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCG AAAGCCTTAA GCCCTTCTTT GACCCTAGAG GAGTAGTAGT TGTAGGCGCC
TCCCGCGAAG AAGAGAAGCC AGGACATGTA ATATTCAGAG TATTACTCGA AAACAGGAAG
AAAGGATTGT TAAAGGCGCC TGTCTACGGC GTTAACCCTA AAGCCGACTA CATCCTTGGA
GAAAAAGTAT TCCCCAGCGT CAAGGACATA CCCGGAGAGG TCGATCTAGC AGTTATAGTG
ATTCCCGCCG AACACGTTAA AAGGGCGATC GAGGACCTAG GAGTAAAGGG TATTAAAGCG
GCGATTATAA TCTCTGCAGG CTTCAGCGAG ATAGGTAGAA GTGACCTTGA GAGAGAGGTC
GCTGAGACAG CTAAAAAGCA CGGTATCAGG ATTATAGGTC CCAACTGTAT CGGCGTCTAC
TCTCCGTGGA GTGGTGTTGA CACGATCTTT CTACCTTACA CAAAGGTTCT CGAAGACGGA
AGGGAAGTTC TGAACGCCCC TAGACCCTCA AAGGGTTTTG TAGCGCTAAT ATCGCAGAGC
GGAGCCGTGG GTACAGCGGC ACTCGACTAT ATGTACGGAG AAGGCATAGG GCTTTCCCAC
TTCGTGAGCA TCGGGAACAA GGCAGACGTG GACGAGGTAG AGCTGGTAGA GTACCTAGGA
GGCGATGACA GGACGAGGGT TATACTCCTC TACCTTGAAA ACATAAAGAG GGGAAGAGAG
TTCATCGAGG TTGCCGGGAA AGTTACCTTG AAGAAACCCG TGGTAGTCCT TAAGGCCGGA
AGGACGTCGG CAGGACGCAG AGCAGCGGCA TCCCACACAG CAGCCCTAGC CGGCGTAGAC
GAGGTGTACG ATGCAGCGTT CAGGAGAAGC GGCGTTATCA GGGCTAACGA TATAGAAGAA
CTCTTCGACT ACGCCAAAGC GCTAGCTATG CAACCACCCG CACGTGGCGA AAGAATAGGG
ATAATCACGG ACGGCGGGGG CGCCGGCGTA ATGGCCACGG ACATCGCCGA AATGCTCGGA
CTCAAAGTCC CAGAGTTACA GGGCAACGCA AGGAGAGAGC TCGAGGAGCT TAGAGAGAGG
GGAATCTTCC CGAGGTACGC CCAGCTATCT AACCCCGTTG ACCTCACGGG TTCTGCTACG
AGCGAGATGT TCGTCGAGGC TACCCGGATA CTGCTTGAAT CGGACGAAGT TGACGCCGTT
GTAGTACTTG CGCTTCACCA AGTACCGGGT ATCCCCGACC CCGTTAAGCT TGCACGCGAG
ATTTCACGCC TTGCGGCAGG CTACGCTAAG CCCGTCGTCG CGGTGGACAC GGGGTGGAGC
GAGGCGGCTA TACTGGAAAG AAAGGAGTTC GACTCTATGG GTGTTCCGTC TTACCCGACG
CCGGAAAGAG CAGTCAAATC GCTAAGCGCG CTGGTCAGAT ACGGCAAGTA CTTGTCTTCT
CGCGGAGCGC TCGGGCGTTA TCTGCAGGAG TATTTGGACT TTAAACGAAA GAACATTTTG
CAAATGCATA AAAATAATTC TACATAA
|
|---|
| Protein sequence | MTSESLKPFF DPRGVVVVGA SREEEKPGHV IFRVLLENRK KGLLKAPVYG VNPKADYILG
EKVFPSVKDI PGEVDLAVIV IPAEHVKRAI EDLGVKGIKA AIIISAGFSE IGRSDLEREV
AETAKKHGIR IIGPNCIGVY SPWSGVDTIF LPYTKVLEDG REVLNAPRPS KGFVALISQS
GAVGTAALDY MYGEGIGLSH FVSIGNKADV DEVELVEYLG GDDRTRVILL YLENIKRGRE
FIEVAGKVTL KKPVVVLKAG RTSAGRRAAA SHTAALAGVD EVYDAAFRRS GVIRANDIEE
LFDYAKALAM QPPARGERIG IITDGGGAGV MATDIAEMLG LKVPELQGNA RRELEELRER
GIFPRYAQLS NPVDLTGSAT SEMFVEATRI LLESDEVDAV VVLALHQVPG IPDPVKLARE
ISRLAAGYAK PVVAVDTGWS EAAILERKEF DSMGVPSYPT PERAVKSLSA LVRYGKYLSS
RGALGRYLQE YLDFKRKNIL QMHKNNST
|
|---|
| |