Gene Tpen_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0324 
Symbol 
ID4600975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp290327 
End bp290935 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID639773084 
Producthypothetical protein 
Protein accessionYP_919736 
Protein GI119719241 
COG category[S] Function unknown 
COG ID[COG2411] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGAGA AGCACCTGCT GTTCTCTAGG CAGTACCTCG AAAAGCTTCT CTCAAACGAG 
AAGACGACAA CGATCAGGGT AAAGCGCCCC CGCCTCAAAC CCGGAGACGA GGTGCTTGTA 
CACTGTGGAG GTAGAGTTCT GGGACGCGCG AAGATAACGT ACATCTATAA GAAGAAGCTC 
AGGGACTTGA CGCTTGACGA AGCGGTCAGA GACGGCTTTG GAAGCCTTGA AGAACTGATA 
CGCAACCTGA AGCGGCACTA TCCAAGACTT TCCGCGGACA GCTACGTCTA CGTGATAAAT 
TTCAGCTGGG TAGAAAGGTT CGAAGAACCG CCCAGCGACG TGGACGTCTC GTGGCCGTAC 
GCGGCCTCCT TTAGAGAAGT AGCAGAGAAA GCGCTGAACA CCCTAGAGCT CGACGAGTTC 
GAGAGAAACG TCCTGAAGCT GGTAGTAAGC GAGGGGTCCA TTCGAAAAGC GGCCTACGCT 
CTGGGCGGCT TGAACCAGCG TTTCATTGTA CGCGACGTGT TGAGGAGAGT CGCCCAGAGG 
CTAGAAGAGA TGGGAGTTCT TGCCCGCGTG AATACAAGCG CGCGCTCTCC GCTGGACACA 
GGGTCATAA
 
Protein sequence
MREKHLLFSR QYLEKLLSNE KTTTIRVKRP RLKPGDEVLV HCGGRVLGRA KITYIYKKKL 
RDLTLDEAVR DGFGSLEELI RNLKRHYPRL SADSYVYVIN FSWVERFEEP PSDVDVSWPY 
AASFREVAEK ALNTLELDEF ERNVLKLVVS EGSIRKAAYA LGGLNQRFIV RDVLRRVAQR 
LEEMGVLARV NTSARSPLDT GS