| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0280 |
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| Symbol | |
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| ID | 4602090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 245890 |
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| End bp | 246741 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773036 |
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| Product | RNA polymerase, insert |
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| Protein accession | YP_919693 |
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| Protein GI | 119719198 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCTCCA AGAAGCAGAA CCGCCTAGTA TTCATGCTTA GAAACACTAC GCCTGCGTTT
GCCAACGCCC TTAGAAGAGC CCTAATCTCC GAGGTTCCAA TACTGGCGAT AGACGAGGTA
ATAGTAACGG AGAATACCAG CGCTTTATGG GACGAAATGA TAGCCCACAG GCTGGCCCTG
GTCCCGCTGA AGATAGACCC GGAGACGTAC GACGCTCTGA GGGATCTCTA CGAGCAGGGG
AAAGACCCTC AGGTGATTTT CTCGCTCGAG GAGGAGGCAG GAGAGCGGCC GAGAACAGTT
CTAAGCGGGC ACCTGAGGTT TGAAGGCATC GAGGGTGCAC CTTTGCCCCC CGAGTCCGCA
GGCATAGAGC CGGTCTCCAA GAATATTCCC ATACTTAAGC TTGGGAAGGG GCAGAAAATC
TCCCTAACGG CGATAGCCAG GATGGGTACA GGCAGGCAGC ACGCAAAGTG GCAACCGGTA
GGCCCCGTGG GTTACAAGTA TAAGCCCGTG GTCAGAATTC TCAGGGAAGA CTTACCCGAG
GATGAAGCAT TGAAGATAAT TTCCACTTGT CCGAGAAGGG TTTTCGGCTA TGTCGACGGG
AAGTTGACAG TTATAAACGA GATGCAGTGC TCGCTCTGCA GAGAATGCGA AGAAAAGTTC
CCCGGAATCG TAGAGGTGGA CGGCGATCCG AGCAACATAA TACTCACTGT GGAGAGCATC
GGGTGTCTAC CACCGGAGAA ACTTCTAGCC GTCGCTGCAG ATGTTCTAAG CAAAAAGCTT
GACAACTTTC TCGAAAAGGT CCAGCTAGCG GTAAGCTCTA CTCTCACCGG TAAAGCTCCA
AGCGAGAACT AG
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| Protein sequence | MLSKKQNRLV FMLRNTTPAF ANALRRALIS EVPILAIDEV IVTENTSALW DEMIAHRLAL
VPLKIDPETY DALRDLYEQG KDPQVIFSLE EEAGERPRTV LSGHLRFEGI EGAPLPPESA
GIEPVSKNIP ILKLGKGQKI SLTAIARMGT GRQHAKWQPV GPVGYKYKPV VRILREDLPE
DEALKIISTC PRRVFGYVDG KLTVINEMQC SLCRECEEKF PGIVEVDGDP SNIILTVESI
GCLPPEKLLA VAADVLSKKL DNFLEKVQLA VSSTLTGKAP SEN
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