Gene Tpen_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0279 
Symbol 
ID4602089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp245138 
End bp245500 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content50% 
IMG OID639773035 
Product50S ribosomal protein L18e 
Protein accessionYP_919692 
Protein GI119719197 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGA CTGGTCCAAC GAACATTCAC CTTCGCCTAT TGATACACAA GCTCAGAAAA 
TACAGCCGGC TCTACAAAGC CCCAGTGTGG AGAGATGTAG CCGAGTACCT CGAAAGACCG
CGTAGGAAGA GAGTCGAGGT AAACCTCTCT AGGATCGATA GGCACATCAA GGAGGGCGAC
GTGGTCGTGG TACCCGGGAA GGTCCTGGGA GGAGGCTCGA TAACGAAGTC GAACGTAGTC
ATAGCTGCGT GGAGGTTTAG CAGATCAGCC CTTGAAAGGC TAGATGGAAG GGTGAAAGCG
ATCTCGATCG AGGAGCTCTT GGAACAAAAC CCTGAGGGTA AAAACGTTAA AATAATAACT
TAG
 
Protein sequence
MKRTGPTNIH LRLLIHKLRK YSRLYKAPVW RDVAEYLERP RRKRVEVNLS RIDRHIKEGD 
VVVVPGKVLG GGSITKSNVV IAAWRFSRSA LERLDGRVKA ISIEELLEQN PEGKNVKIIT