| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0149 |
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| Symbol | |
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| ID | 4600641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 124705 |
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| End bp | 127392 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639772903 |
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| Product | solute binding protein-like protein |
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| Protein accession | YP_919562 |
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| Protein GI | 119719067 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.450727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA AACTTTCATT ACTACTCGTA GCACTGCTCG TAGCCGCATT CCTGGCTCCG
CTTCTAAGCG CACAACCACA GCCACTCCAG GGTCCATGGG TAGACGAGGT ATCCTTCCTC
AAGGAAGGCG ACCCAGCGAA AGTAATGGAC ATGATTGCCA AGGGAGACGT GCAGGTTTAC
TTCAGCGATG TCCGCGTCGA CGCGGCGATA GCTCAGAGGC TAAAAACAGA CCCCAACATA
AACTACAAGT ACGCCTTCGG GCTCTACTTC GAGCTAACGT TCAACCCCGT GGGACCGGAG
TTCCCGAAGA CCGGGAAGCT TAACCCCTTC AGCGTTCCGA GGATCAGGGA GGCTATGAAC
TACATTGTCG ACAGGAACTA CATCGTGAAC GAGATAATGC TGGGCTTCGC TGTACCCAAG
TGGCTACCCC TGATCTCCCA GTTCCCCGAG TACGCTAAGC TGGCGGACAC CGTTAAGTTG
CTCGAGGCAC AGTACAGCTA CAACTTCGAA AAGGGCAAGG AGATAATATT CGAGGAGATG
GCGAAGCTGG GCGCAACGTA CAAGGACGGG AAGTGGTACT ACAAGGGAGA ACCTGTTGTC
ATAAAGTTCC TGATAAGAAC CGAGGACCAG AGGAGGCGGA TAGGCGACTA CGTTGCAGAC
CAGCTGGAGA AGCTCGGCTT CACCGTTGAA CGAATGTACA AGACTGCGCG CGAAGCCAGC
CCGATATGGA TACGCGGAAA CCCGGCAGAC GGGCAGTGGC ACATATACAC CGGAGGCTGG
ATAACTACGG CTGTGAGCAG AGACGATAGT AGCGTCTGGG GATACTTCTA CACTCCGCTC
GGAAGACCTG AGCCGCTCTG GCAGGCTTAC AAGCCGGACC CCGTCTTCAT GGACATAGCT
ACTAGACTGT GGAATGGGCA GTTCAAGACC ATAGAGGAAA GACAGGAGCT TATGGCTAAG
GCGGCTGTCC TTGCTCTCAA GGACTCCGTT AGAGTCTGGC TGGTAGACCA GATAGTACCC
TACATCTACA GCAAGAAGGT GGACCTTGCG GCCGACCTTA GCGGAGGCTT CTCATCTCCG
ATCTCTCTCA GAACCTTGCG CTACGTCGAC AAGGCGGGAG GTAGCGTGAA AGCTGCCATG
AGAGAAGTAC TAGTAGAACC TTGGAACCCG GTTGCGGGGA CGAACTGGGT CTACGATGCA
GTACTTATCG GGGCAACACA GGGTTATGCG TTCCTCATAA GCCCGTACAC AGGCCTACCG
CTACCCGAGA GGGCTGTCAG CGCGGAGGTC TATGCGCTGA AGGGCACCCC CACTACTAGC
TCGAGCGACT GGTGCAAGCT CACGTTTGTC GACAAGGTCG AAGTACCCGC GGACGCGTGG
TACTCTTACG ACGTGAAGAA CAACAAGGTC GTGACGGCCG GAGAGGCCGG TGTAAAGAAC
GCGCAGTTCA AGATAGTGGT TAGCTACGGC GACGTCATAG GCAAGATAAA GTATCACGAC
GGGACAACGA TGAGCCTCGC GGACTGGGTT ATAGGCTGGC CTCTGACGTT TGCCAGGGTT
GACCCGAGCA GCCCGCTTTA CGACGAGTCA GCGGTTCCGA GCTTCCAGGC CTGGAGATCC
TACTTCATTG CTTGGCGCTT CGTGAGCACT TCCCCGCTCG TGATAGAGTA TTACGTGAAC
TACACGAGCC CCGACGTCGA GCTGATAGTA TCCGGGTTCG CCGGGTGGCC TAACTTCCCG
TGGCACGCCC TCGCCATAGG TATAAGGGCC GAGGAGAAAG GCTTGTTGGC GTTCAGCGCT
GACAAGGCAG ACAAGATGAA GGTTGAGTGG ATGAACTACA TCGGCGGACC GAGCCTCGAC
ATCCTCTCGA AGATGCTCGA CGAAGCCCTC GCGGAGGGCT ACATCCCGTT CAAGGACTTC
ATGAGCAAGT ACGTGAGCGT CGACGAGGCT AAAGCTAGGT ACAACGCCCT TAAGAGCTGG
TACGCGGCAC ACAAGCACTT CTGGGTGGGC GACGGTCCCT ACTACCTCGA CACCGCGGAC
TATAATGCTC ACGTAGCTGT TCTCAAGGCT AACAGGAACT ATCCTGACAA GTCCGACAGG
TGGGCCTGGC TCGCAACTCC GCCGATACCG GAGGTCGCCG TGAGACCGCC GGACAACGTC
GTGCCAGGGC TCGAGGCCGT GTTCACGATA CAGGTTACCT ACAAGGGCCA GCCGTACCCC
AACAAGCGCA TGGACTTCGT GAAGTTCCTG GTGCTGGACC CAGCCGGCAA CGTACTCGCG
AAGGGCTCTG CAACGCCCAC CGCCGAGGGT GTCTGGCAGG CTAAGCTGAG CCCGGAGGAC
ACGGGCAAGC TGACGCCCGG CCCCTACAGG ATAATGGTGA TAGCGCTGAG CAAGGACGTA
GCGAGCCCGG CTATAAAGGA GTCTCCGTTC ACTGTCATCC CGCAGATTGC CTACTTCCAG
ACCATGGTCG CCGGGATTAG AGGGCAGCTC GAGTCTAGGA TTGCTGGCGT CGAGACTGGT
GTAAGCGAGG TTAGAGGCAA GATATCGGAC ATCGCTAACA GTGTTTCGTC GCTACAAGGC
ACCGTCAATA CCGTGCTTGC CCTTTCAGTG CTAAGCCTGA TAATAGCTGT CGTGGCAGTC
TTCCTCGCTT TAAGGAAACC AAAAGCAGAA ACCGCCCAAA AACAATAA
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| Protein sequence | MNTKLSLLLV ALLVAAFLAP LLSAQPQPLQ GPWVDEVSFL KEGDPAKVMD MIAKGDVQVY
FSDVRVDAAI AQRLKTDPNI NYKYAFGLYF ELTFNPVGPE FPKTGKLNPF SVPRIREAMN
YIVDRNYIVN EIMLGFAVPK WLPLISQFPE YAKLADTVKL LEAQYSYNFE KGKEIIFEEM
AKLGATYKDG KWYYKGEPVV IKFLIRTEDQ RRRIGDYVAD QLEKLGFTVE RMYKTAREAS
PIWIRGNPAD GQWHIYTGGW ITTAVSRDDS SVWGYFYTPL GRPEPLWQAY KPDPVFMDIA
TRLWNGQFKT IEERQELMAK AAVLALKDSV RVWLVDQIVP YIYSKKVDLA ADLSGGFSSP
ISLRTLRYVD KAGGSVKAAM REVLVEPWNP VAGTNWVYDA VLIGATQGYA FLISPYTGLP
LPERAVSAEV YALKGTPTTS SSDWCKLTFV DKVEVPADAW YSYDVKNNKV VTAGEAGVKN
AQFKIVVSYG DVIGKIKYHD GTTMSLADWV IGWPLTFARV DPSSPLYDES AVPSFQAWRS
YFIAWRFVST SPLVIEYYVN YTSPDVELIV SGFAGWPNFP WHALAIGIRA EEKGLLAFSA
DKADKMKVEW MNYIGGPSLD ILSKMLDEAL AEGYIPFKDF MSKYVSVDEA KARYNALKSW
YAAHKHFWVG DGPYYLDTAD YNAHVAVLKA NRNYPDKSDR WAWLATPPIP EVAVRPPDNV
VPGLEAVFTI QVTYKGQPYP NKRMDFVKFL VLDPAGNVLA KGSATPTAEG VWQAKLSPED
TGKLTPGPYR IMVIALSKDV ASPAIKESPF TVIPQIAYFQ TMVAGIRGQL ESRIAGVETG
VSEVRGKISD IANSVSSLQG TVNTVLALSV LSLIIAVVAV FLALRKPKAE TAQKQ
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