Gene Tpen_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0116 
Symbol 
ID4601173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp90942 
End bp91565 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID639772870 
Productmethyltransferase type 11 
Protein accessionYP_919529 
Protein GI119719034 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0155086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAACGC TGGACAAGCT TTTCGAGAGT GGAGTCTACT CGCCGACTAA CTTCGCGATG 
AGCCTGGGGC TCGACAGAAA GCTTAGAGGC ATAGTCTATA ACCTCGCTAG GGGCAGGGTA 
CTGGATGTGG GCTGTGGCGA CGGTTACTAC TCGCTACCCT TGCTGGAAAA CGCCCAGGAA 
GTAGTGTGCG TCGACCCCCT CGCACGTAAA GGGTCAGAGA GCGATCCCAG ACTACACGTA 
GTGAAGGCTA TCGCGGAGTA CCTCCCGCTA CGCAGTAAAA GCGTAGAGTT CTCCACCGCG 
ATGTTCAGCT TCAGGGACTT CTTGGACAAA CCTAGAGGGC TCTCTGAGAT GAAGAGAGCT 
TCTAGAATAG GCGTGTTTAT AGTGGAGATT TTCAACCCCT CCACGTGGTT TAGGCCCTTC 
CTCTACGCCT ATGTCTTGTT CATCGCGCCT CTACTCGCGT TCCTAGTATC TAGGGGTAAA 
GGCAAGGGGT GGAGGCTCCT ATACCCAACA ATTAGGATCA TGCCCAGAGC CTCTCTCTTT 
GAAAGGATGG GCGGAAAGGT GCTCGTTAGC AAGGGGTTTG GCTCTCTGGC CATCGTATAC 
CTGCCAGTAA ATCCTCGTGG GTAA
 
Protein sequence
METLDKLFES GVYSPTNFAM SLGLDRKLRG IVYNLARGRV LDVGCGDGYY SLPLLENAQE 
VVCVDPLARK GSESDPRLHV VKAIAEYLPL RSKSVEFSTA MFSFRDFLDK PRGLSEMKRA 
SRIGVFIVEI FNPSTWFRPF LYAYVLFIAP LLAFLVSRGK GKGWRLLYPT IRIMPRASLF 
ERMGGKVLVS KGFGSLAIVY LPVNPRG