Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0014 |
Symbol | |
ID | 4601060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 12649 |
End bp | 13386 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639772767 |
Product | ABC transporter related |
Protein accession | YP_919427 |
Protein GI | 119718932 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGACGA TACTCTCCAT AAGGAACATC GTCAAGACGT TCAAGGAAGG CGGGAAGACA CTACCGGTTC TCGACCACAT ATCCTTCGAC GTCGGAGAAG AGTTCGTCGC GATCCTAGGG CCCTCCGGGT GCGGGAAGAC CACGCTTTTA AGGATAATAG CCGGGCTTGA GAAAGCCGAT AGCGGGGAGA TAGTGTTCGC TAGAGGCGAT TCGCGCATAG GCTTTATCTT CCAGTCTCCA ACCCTGCTAC CCTGGCTGAC TGTACTCGAA AACGTGGCGC TCCCCCTAAG GGCTAACGGC GTTCCGCGCA GGGAGGCCGA GGAGAAGGCC AGGAAGTACA TCTCCCTGGT GGGCCTCCAA GCCTTCGAGA ACTTCTACCC GCACGAGCTG AGCGGCGGGA TGAAGCAGAG AGTCAATATC GCGAGGGCAC TCGCGGTGGA GCCAGTACTG CTACTCATGG ATGAACCCTT CTCGCAGCTC GACCCGTTGA CCGCGGAGTC GCTCAGGTCG GAGATTCTGG ACATGTGGAT GTGGGGTGTA ACGACCGTAA GAGCGATAAT AATGGTTACC CACAACGTCG ACGAGGCAGT CTTCATGGCC GACAGAATCA TCGTGCTAAC AACGCGGCCC GCGAAGATCG CTGGAATAGT GCATGTCGAC CTGCCGAGGC CTAGGGATAG GAGGTCGCCG GAGTTCCAGA AGGTCGAGGA CCAGGTATAC GAGTACATAA GCGCCTAA
|
Protein sequence | MQTILSIRNI VKTFKEGGKT LPVLDHISFD VGEEFVAILG PSGCGKTTLL RIIAGLEKAD SGEIVFARGD SRIGFIFQSP TLLPWLTVLE NVALPLRANG VPRREAEEKA RKYISLVGLQ AFENFYPHEL SGGMKQRVNI ARALAVEPVL LLMDEPFSQL DPLTAESLRS EILDMWMWGV TTVRAIIMVT HNVDEAVFMA DRIIVLTTRP AKIAGIVHVD LPRPRDRRSP EFQKVEDQVY EYISA
|
| |