| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4320 |
|---|
| Symbol | |
|---|
| ID | 9158502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014159 |
|---|
| Strand | - |
|---|
| Start bp | 75429 |
|---|
| End bp | 80390 |
|---|
| Gene Length | 4962 bp |
|---|
| Protein Length | 1653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | amino acid adenylation domain protein |
|---|
| Protein accession | YP_003649220 |
|---|
| Protein GI | 296141978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGAACG ACCTCACCAC CGCCCGCCGC GAGCTCCTCG CGCGCCGCCT CCGTGCCGCC
GGGCTCACGA CCACACCGTC GTCGGTCGCG GCCGACCCCG CCGCACTGAC CGCCCCCGAG
CGGCGGATGT GGTTCGGCCA GCGCCGCGAT CCGTCGGGCA CGGAGCTGAA CATCCCGTTC
GCGTACCGCC TCACGGGCGA GCTCGACGCG GACCGGCTGC TCGGCGCGCT GCACGCCGTG
GTCGAGCGGC ATCCCGCCCT GCGCACCGTC TTCGACGAGG ACGGCGCCGG CCCGCGGCGC
ACGGTCCGGG CGGCGCAGGT CGGCTGGCAG CGCACCGACC TCACCGACCT CACCGAGGGT
GAACGGGAAC GCCGGATCCG AGTGCTCGCC CGGCGGGACG CGGACGCGCC CTTCGACCTG
TCGCGGGACC CGCTGCTGCG CGCGCACCTG ATCCGGACCG CCGCCCGCGA GCACGTGCTG
GCGCTGGTGG TGCACCACAT CGCCTTCGAC GACGCCTCCT TCGCACTGCT GCTGACGGAC
CTGGCCGCGG CCTACGCGGG CCGGTCGCTG CCGCCGGCCG CAGCGGGACG TGCGGTCGTC
GCGCCGGCAC CGGCGGACCG GGAGCGGGTG GCCGCCGCGG CGGAGCGGCT GCGCCCGCTG
CCGGATCCGG TCGCGCTGCC CGGCGATACG GGGACCGATG TCGGACCGGC GAGCGCGTCG
GCCGCACTGC CGGACGGCCT CGACGACGCG GTCGCCGGCG CGGCCCGCGC CCTGGGCGTC
ACCCCGTTCA CGTGGCTGCT GACCGCGCAC GCGGTACTGG TGGCGCGGCT GTTCGATGCC
GACGACGCCG CCGTCTCGGT GCCGGTGACG GCGCGCCCGG CCGGCACGGA GGACGCGATC
GGCTACTTCG GGACCATCAC CGTGCGCCGC CTGACGGCTC GTCCGGGCGA GAGCTTCCGG
ACCGCCGCCC TGCGCGTGCA GGACGACGGT GCCGCGGCCC TCGCCTTCGC GGACGTGCCG
GTGGACGCGG TGATCGGCGC ACTCGACCCT GCGCGGGCCG GCGACGCCGA CGGCTTCGCC
CGGCTCGCGC AGCTGAGCTT CTCCACTCGT GCGGCGGTCC CAGGGCCGGA CCTCGAGGGC
ATCGCCTCCG CGCCGCTCGA GCTGGCGACG CCCGGCGCGC AGGTGCCGTT CGAGGCGTCT
GTCATCCGCG CCGCGCCCGG GACGCCGGAG AGCCGGATCG AGGTGCGGTT CCGGCGCGGC
CGGGTCGACC CGGCGGCCGT CGAGGCGTAC CTCACGGCGC TGCCGGTGTT GCTGGCGGCC
ACCGTCGCCG ATCCCGACGC GGACGTGCGG ACCCTGCCCC TCACCACCGC GCCACACGCC
GACGACCTGA TCGCCGCGGG CCGCGGGCGC GCCGTCGATG CCGGGCACCC GGACACCCTG
ACCGGGCTGT GGGAGGCGGC CGTCGACCGC GCGCCGGAGG CGCTCGCGCT GCTCACCGAC
GAGGACGCGG TCACCTACGC CGAGGCCGAC CGGCGCGCCG AGGTACTCGC CCGCGTGCTC
GATCGCCGCG GTGTGCAGCA GGGCGACGTG GTCGCGCTCG ACCTGGGCGG CGGCATCGAC
TTCCCCGTCG CCGCGCTCGC GGTGATGAAG CTCGGGGCCG CGTACCTGCC GGTCGATCCC
GCCTACCCCG CGGAGCGCAA GCGGCTGCTC CTGGGCGACG CGCGGCCGCG CCTCGTGCTC
GATGCCGCCG CCGTCCGGGT CGCGCTGGAC GGTGCGCAGG GCACTGTCGA CACCGCCGAC
CGCACCCGTA TCACCCGGAC CCGGCCGCAG GATCCGGCGT ACGTGATCTA CACGTCCGGA
TCCACGGGCC GGCCCAAGGG AGTGGTCGTC GCCCACGCGG CGATCGCCGA GCACCTGGCC
GGCCACCTGA CGGCCGAATC ACTGGACCCG ACCGATCGGC TGCTCCTGAC CGGTTCCGTC
AGCTTCGACG CCTCCGTCTT CGAGGTCTTC GGCACACTCA CCGCGGGAGC CACGCTCGTG
ATCGGCCGCC CGGGCGGGGC GGCGGACTTC GGCTACATCA GCGAGCTGGT CGCGCGGCAC
CGCGTGAGCG TCGTGCACAT GGTCCCGTCG ACCCTGGCGA CCTACCTGAT GCTGCCGGAC
GCAGCGCGCT GGCGGTCGGT CCGCTGGATC CCCGTCGGCG GTGAGGCCCT GCCCGGCGGC
GTGGCCGACC GCGCGCGGGC GGTACTCGGC GCACGCATCA GCAACAACTA CGGGCCCACC
GAGGCGGTGG TCGCCGCGAC CGGCCGAATG GTCGACGAAC CCCGCGCGGG CGAGACGGTG
CCGATCGGCG GCCCCACGCC CGGGACGGCG CTCTACGTGC TGGACCGTGC GCTGACCCCG
GTCCCGGACG GTATCGCGGG AGAGCTGTAC CTCGGCGGCG AGCAGCTGGC GCTCGGCTAC
CTGGGCGACC CGGTGGCGAC GGCATCGAAG TTCGTGGCCG ACCCGTGGCG CAGTGGCGGC
CGTATGTACC GAACCGGTGA CCGGGTGCGC CGGCGTGCCG ACGGCGATCT GGAGTTCCTC
GGCCGCACCG ACGATCAGGT GAAGATCCAC GGTTTCCGCA TCGAACCCGG TGAGGTCGCG
GCCGTGCTGT CCGGGCTCGA GGGCGTAGGC GGGGCGGCGG TCGTCGCTGT TGACGATCCG
GTGACGGGCC CGGCCCTCGC CGCCTACCTC TGCCCCGCCG AGGTGGACGT GGCGGCGGTG
GCCGCGGCCG CCGAGCGCGC GCTGCCCGCG CACCTCGTGC CGAGCGCGTA CGTCGTGCTC
GACGCGCTGC CGATCGGCCC GAACGGCAAA CTCGCCCGCT CGGCGCTGCC GGCGCCGCAG
CGCGCCGCGG CCTCAGGGGG CCGCTCCCCC GCCACGGCCA CGGAGCGCAC CGTCGCCGCT
GCCGTGGCGA GACTCCTCGA CCGGCCCGCG ACCGAGATCG CGGCGACCGA CTCGTTCTTC
GTCCTCGGCG GCCACTCGCT GCTGGTCACC CGGCTGGTCG CGCAGCTGCG CGCCGAATCC
GGCATCGAGC TCTCGGTGCG GGCGGTGTTC GACGGGCCGA CGGTCGAGCA GATCGCCGCG
GCGATCGACG TCGGCGCGGG CGGCGAGCTG CGGCTGCCCC TGCTCGCCCG GCATGCGACC
CTTCCTGACA CGGTGCCGCT CACGGCCTCG CAGCGCTCGA TCTGGTTCGC CGCCGCACTC
GCCGCCGGGG TGGACGCGGC TCCCGGCGCG GGGGTCATCG AAGCGGCTGT GCGGCTCGAC
GGCCCCGTCG ACGCCGAGGC GCTGGCCGCG GCACTGGGCG ACGTGGTGGC GCGGCACGAC
AGTCTGCGCA CCGTCTTCTC CACCGACGAC GGCGTGCCGA CCGCCCGGGT CCTCGGCTCC
TGGACTCCGG AGCTTCCCAC CGTGCGCGTC GCCGAGGATC CCGCCGGGGC ACGTGCGGCC
TTCCTCGCCC GGCCCTTCCC GCTCGAGGGC GCCCCGATGC TGCGTGCGCA GCTCCTCGTC
ACCGGCACGG CGACGGTCCT GCAGGTGGTG GTGCACCATC TGGTGACCGA CCACCGGTCG
ATGGAGATCC TGGTCGACGA TCTCTTCGCG GCGTATCGCG CGCGCACGCT GGGCGCACCG
GTCGCGGCCC CGCCCGCGCA CCGGTTCGCC GATCACGCGC TCTGGCAGGC CGAGGTCTTC
GGCTCGGAGT CCGGCCGCGC CGCCGTCGAC GCGGTCGCGG CTGGCCTGCG CGACCTGCCG
GGCCAGATCC CGGCATTGCA CGACCACCCG CGGCGGGCCG AGCTGACACT GACCCGCGGG
CATCGCGCAG TGTTCCACGT GGAGCCTGCG CTGCGGGCGC GGCTGCGCGA GGTCGCTCAG
CGGCACGGTG CGACGGAGTT CGTCCTTGCC GACGCCGCCC TGGCGGTGGT GCTGCACCGC
GTGGCGGGCG GCCGTGACAT CGCCATCGGC ACCGCGGCCT CCGCGCGCAC CGAACCGGCC
CTCGACGCGA TGGCCGGCCT GATCGCGAAC ATGGTGGTGC TGCGCACGAC GGTCCGGCCG
GAGTCCACCC TCGCGGACGT CCTCGACAGC GCACGATCCG CGGCGGCGCT CGCCTTCGAC
CGGCAGCAGG TGCCCTTCGA GCTGGTGGTG GACGCAGTCG CACCCGAACG AGGACCGGGC
CGCAATCCGC TGTTCCAGAC GGTGCTGCAC GTCCGCGACG ACGCCGCTGT CCTCGCCCCG
CGCACGGTCG CCCCGGGACT GGGTGCCACC CGCCTACCGA TGGATTTCGA CGTCGCCCTC
GTCGACCTTG CGGTCAGCCT GTTCGGTACC CCTGACGGGG GGTACGACGG TGCCGTCATC
GCCGGTCCGG CGGTCTACAC CGCAGCGACG GCTGCGCGTC TCGCCGACGC CGTGGCCCGG
GTGCTCGCCG CTTTCGTCGA CCCGGCGACC CGCGTCGACG CCGTGCTGCC CGAGCTCGGG
GTCCGCACCG AGCCGGTGGC CCCGCTGCTC GATGCGGCTG CGGATTGCGC CAGAACGGAT
TTCGGGACAA CAGGATCCGC GCTCTCCGCG GAGGAGGCGC TGTCGCAGCT GCTCGACATC
CTCTCCGAGC TGCTCGGCGT GCCCGGCATC ACCGCCGACG ACAACTACTT CGCCGTCGGC
GGCGACAGCG TGACCTCGCT GCAGTTCGCC GCCCGCGCCA CCGCGATCGG CGTCCCTGTC
ACGCCGCAGC TGGTCTTCGC GACCGCGACG CTCGGCGAGC TGGTCGCCGC CGCCACCGCG
GCCGGGCCCG GTCCGGCCAC CCCGGACGGC GCGGATGCCG CAGCGCCCGC GAGCACCACC
GGTGCGGCAC CCGTGAGCAC CACCGGTGCG GCGGCGATGA GTGCCTCTGG CCTCGACGCC
GATCAGCTCG CCGCCCTCAC CGCCGCCTGG AAGGATCGCT GA
|
|---|
| Protein sequence | MTNDLTTARR ELLARRLRAA GLTTTPSSVA ADPAALTAPE RRMWFGQRRD PSGTELNIPF
AYRLTGELDA DRLLGALHAV VERHPALRTV FDEDGAGPRR TVRAAQVGWQ RTDLTDLTEG
ERERRIRVLA RRDADAPFDL SRDPLLRAHL IRTAAREHVL ALVVHHIAFD DASFALLLTD
LAAAYAGRSL PPAAAGRAVV APAPADRERV AAAAERLRPL PDPVALPGDT GTDVGPASAS
AALPDGLDDA VAGAARALGV TPFTWLLTAH AVLVARLFDA DDAAVSVPVT ARPAGTEDAI
GYFGTITVRR LTARPGESFR TAALRVQDDG AAALAFADVP VDAVIGALDP ARAGDADGFA
RLAQLSFSTR AAVPGPDLEG IASAPLELAT PGAQVPFEAS VIRAAPGTPE SRIEVRFRRG
RVDPAAVEAY LTALPVLLAA TVADPDADVR TLPLTTAPHA DDLIAAGRGR AVDAGHPDTL
TGLWEAAVDR APEALALLTD EDAVTYAEAD RRAEVLARVL DRRGVQQGDV VALDLGGGID
FPVAALAVMK LGAAYLPVDP AYPAERKRLL LGDARPRLVL DAAAVRVALD GAQGTVDTAD
RTRITRTRPQ DPAYVIYTSG STGRPKGVVV AHAAIAEHLA GHLTAESLDP TDRLLLTGSV
SFDASVFEVF GTLTAGATLV IGRPGGAADF GYISELVARH RVSVVHMVPS TLATYLMLPD
AARWRSVRWI PVGGEALPGG VADRARAVLG ARISNNYGPT EAVVAATGRM VDEPRAGETV
PIGGPTPGTA LYVLDRALTP VPDGIAGELY LGGEQLALGY LGDPVATASK FVADPWRSGG
RMYRTGDRVR RRADGDLEFL GRTDDQVKIH GFRIEPGEVA AVLSGLEGVG GAAVVAVDDP
VTGPALAAYL CPAEVDVAAV AAAAERALPA HLVPSAYVVL DALPIGPNGK LARSALPAPQ
RAAASGGRSP ATATERTVAA AVARLLDRPA TEIAATDSFF VLGGHSLLVT RLVAQLRAES
GIELSVRAVF DGPTVEQIAA AIDVGAGGEL RLPLLARHAT LPDTVPLTAS QRSIWFAAAL
AAGVDAAPGA GVIEAAVRLD GPVDAEALAA ALGDVVARHD SLRTVFSTDD GVPTARVLGS
WTPELPTVRV AEDPAGARAA FLARPFPLEG APMLRAQLLV TGTATVLQVV VHHLVTDHRS
MEILVDDLFA AYRARTLGAP VAAPPAHRFA DHALWQAEVF GSESGRAAVD AVAAGLRDLP
GQIPALHDHP RRAELTLTRG HRAVFHVEPA LRARLREVAQ RHGATEFVLA DAALAVVLHR
VAGGRDIAIG TAASARTEPA LDAMAGLIAN MVVLRTTVRP ESTLADVLDS ARSAAALAFD
RQQVPFELVV DAVAPERGPG RNPLFQTVLH VRDDAAVLAP RTVAPGLGAT RLPMDFDVAL
VDLAVSLFGT PDGGYDGAVI AGPAVYTAAT AARLADAVAR VLAAFVDPAT RVDAVLPELG
VRTEPVAPLL DAAADCARTD FGTTGSALSA EEALSQLLDI LSELLGVPGI TADDNYFAVG
GDSVTSLQFA ARATAIGVPV TPQLVFATAT LGELVAAATA AGPGPATPDG ADAAAPASTT
GAAPVSTTGA AAMSASGLDA DQLAALTAAW KDR
|
|---|
| |