Gene Tpau_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4235 
Symbol 
ID9158423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp4372138 
End bp4372857 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003649142 
Protein GI296141899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGA CGATCGTTCC CCTCACTCTG GGCGGATTCG ATGACTTGCC CAAGCACGTG 
CGCCGGTGTG TGTACTGGGA GGTGGCACCC GAGGCCGAGA CCCTCATGGA CACCGAATTC 
GACAAAGAGG CCTGGCTCTC GATGCTCATG CTCGAATGGG GATCGTGCGG GCAGGTGGCG 
ATCGCTCATG CACCGGACGG CACCTCGCGG TTCGTCGGAG TGGCCTTCTA CGCCCCACCC 
CGCAGCGTGC CCCGCGCCGG CACCTTCCCC ACAGCGCCGG TGAGCCCGGA CGCCGTGCTG 
CTCACCTGGG TGGGCGCGGA GCCCGGTGTC GAAGAACGGG TCCGCGAAGA ACTGGTGACC 
GCGGTGTGCA CCGATCTCGT GCGTCGCGGT GTGCGTGCAG TGGAGGCATT CGGGTTGCTG 
ACACCCGTGG GACAGAGCAC GGAAAGCGTT GCGGCACAGA TTGATTGCGG AGCCTGCGGG 
TGTAAGACAG CGCCGCTGAC CGATGCCGAT TTCCTGGAGC GGATGGGCTT TGAAACGGTG 
GCACCGCATC ACCGCTATCC CCGGATGCGG CTCGAACTCT CCGAGGGTCT GGGCTGGAAG 
GCCGGTGTGG AACACGCACT GGAGCAGTTA CTCGCGGCGG GCACGGCCGA GGCCGCGCTG 
CGTGAGGCGC TGGAGGGCAC CGAAGACCCC GCCGCGCCCG TGTGTCGCGC CGAGGACTGA
 
Protein sequence
MALTIVPLTL GGFDDLPKHV RRCVYWEVAP EAETLMDTEF DKEAWLSMLM LEWGSCGQVA 
IAHAPDGTSR FVGVAFYAPP RSVPRAGTFP TAPVSPDAVL LTWVGAEPGV EERVREELVT 
AVCTDLVRRG VRAVEAFGLL TPVGQSTESV AAQIDCGACG CKTAPLTDAD FLERMGFETV 
APHHRYPRMR LELSEGLGWK AGVEHALEQL LAAGTAEAAL REALEGTEDP AAPVCRAED