Gene Tpau_4225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4225 
Symbol 
ID9158413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4356484 
End bp4358979 
Gene Length2496 bp 
Protein Length831 aa 
Translation table11 
GC content73% 
IMG OID 
Productglycoprotein 
Protein accessionYP_003649132 
Protein GI296141889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.553317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGGT CGGCCCGCCT CCTGTGCGTG CTGACGCTGC TGGTCGCGAT GAGCGGCCTC 
GCCGCCCCGA GCCGGGCAGG CATGCCCGAC GCGCAATTCG TCCGGATCGC GATCGCCGAG
ATCACCCCGC AGGTGACCGC CGACTCTCCG AACGATGTGA CGGTGCGCGG CACCATCACC
AACTTCGGTG ACCGCGATGT CAGTGACCTG GAGGTGCGGG TGCAGCGCGC CCCGGCGATC
GCCGCCTCGT CGCAGTTGCG CAGTGACCTG GTCGCCGATA ACAACGTCTA CGACACGATG
GGCCGGTTCC AGCCGGTGGC CTCGGTGCTC AAGCCCGGGC AGAAGTCCGA GTTCACGCTC
ACCATCCCGG TCCGCAGGGA CCGCACCACC ACCGGCCCCA CCCTCGCGAT CGACCGGCCG
GGGGTGTACC CGCTCCTGGT CAACGTGAAT GGTAAACCCG CGTACGGCGG CGTCGCCCGG
CTCGACGATT CGCGCACCAT GCTGCCCGTG CTCGCGCTCC CGGACACCGA CGGTGCCGGC
GGCTCGCCGG CGGACGGCGA GCTCGACAAG CCGGTCACCA ACTCGCCGGC GCAGATGACG
GTGCTCTGGC CGCTCGCCGA CAATCCCAAG CTCGCCGGCG GTGTCCCGGG CGGTGGCGAC
GCGCCGGTCC GACTGGTCGA CGATGCACTC GCCGGTTCGC TTGCGGCAGG CGGACGGCTC
GACGGCCTGC TGGCCGCGTA CGAACAGGCC ACACGTGGCC CCGATCCCCG GCACACCGCG
ATGCGCGCGG GCTCCTGCCT GGCGATCGAC CCCGACCTGC TGGTCACCGT GCAGGCGATG
ACGGGGCCGT ACCGGGTGAG CCGCAATCCG GCGGATCCGC GAGGCCCGAC CACGGCCGGG
ACCGGATCCG ACGAGGCATC GGCGTGGCTC GCCCGGCTGC GCCAGGTGGC CGAGGACTCG
TGCGTGGTGG CACTGCCGTT CGGCCAGGTC GACCTGGAGG CCCTGGGCCG TTCCGGTGAG
CCCTCGCTGC AACGGGCGGC GCTGGGCAAC TCCGCCGACG TGATCGATTC GGTGCTCGGG
GTGAAGTCGG TGCGGGGCGT CACGCTGCCC ACCTCCGGGC TGCTTCTGGG CGACGGTGCG
CGACAGTCCG TGGCGTCCGA TAACTCGGCC GCCGTGGTGG CCGCGACGGC CGTCGGCGCC
CCCGCGCGGG GCCGCGCGAG CGCGAACGGC ATCGTCCCGG TGGGACAGGG GATCGGGGCC
GCGCTGTTCG ACCCGTACGT GACCACGGCG CTGGCCGCGC TCGGCGGGAC CAACGGCAAC
GCGGAACGCG GTGTGAGCCC CGGCGCGGCC GGATCGACAC CGCAGTCGGT GACCTTCGAC
CTCGACCAGG AGTCCGAGGT GTCCCGCCGG CAGGCCGCGG TGGGCGCCGT CACCGCCGCA
GCGCTCGACC CCACCCAGCG CTACGCGCCG CCGAACGGCT GGGCCGCCAC CACGGCAACC
GACCCGGTCG CCACGGTCAC CGGCCGCGCC TCGTTGATCG TGCCGCCCCA GGTGTGGGCC
GCCGGCCCGG ACGACGCCAA GGCCATCCTG GATGCGGCGT CGTCACTGTT CACAGCCGGT
ATCGCCGGCC CGCGCACGTT CCGGGACGTG GTGGCCTCGG CCCAGTCCGC GGGGCGCGAC
CCGGCATCGG CCGCCGATCC CTGGACGCTG CGGCAGCCGA CCGGCACCGT CGCTTCCCGG
GTGCCCGACC GGATCGTGAC CGACGCCGCC GACCACGTCC GTCAGGTGGA CCGGCTCGGC
GCGGCCCTGA TGCCGCTGCC GAAGACCCCG CTCACGCCAC GGGTGTACAC CTCGCCGCTG
CGCGAGGACG CGGTGCGGGC GCTGCGCTGG TCGCCCGCGC GCGCGGCGGT CGACGGTGAC
GCCACCATCC GGATGACCGC CGCACGGGCC TCGCTGTCGG CGCAGCTGTC ATCGGTGAAC
ATCTTGTCGC CGGGCGGCAC CTACACGCTG GCCTCCGATA AGTCGCCGCT GTTGCTGGCC
GCCCGCAACG ATCTGCCGTT GCCGATCCGA ACGGTGATCA AGGTGGGCGC TCCGGACGGG
TTCGCGATCG ATGCCTCCGA AGTGCAGGAG CTACCGGCCC GCGGGACGCG GCAGATCGAG
CTTCCCACCA CCGCGAACGA CTCCCGGCAG GTGGCGGTGC AACTCTCGCT CCGGACCACC
AGCGATATGC CGCTGGGCGA GCCGATCCAG ATCTCCGTGC ACTCGAACGC GTACGGCCGG
CCCCTGTTCT GGATCACCTG CGCGGCGGGC GTGCTGCTGG TGCTGCTGTC GGGTCGCCGG
CTGTGGCGCC GGTTCCGGGG CCGTCCCGAC CGCGCGGACG CCGACCGGCC GCCCGCCGAC
GAGCACGAGC GGCGTCTGGC GAACAGTTAC GCTGCACACC GGAACCCCAC CCCGCCGGAG
CAGCCGTCCG GCACCCCGGA CCCGAAGGAC CCATGA
 
Protein sequence
MIRSARLLCV LTLLVAMSGL AAPSRAGMPD AQFVRIAIAE ITPQVTADSP NDVTVRGTIT 
NFGDRDVSDL EVRVQRAPAI AASSQLRSDL VADNNVYDTM GRFQPVASVL KPGQKSEFTL
TIPVRRDRTT TGPTLAIDRP GVYPLLVNVN GKPAYGGVAR LDDSRTMLPV LALPDTDGAG
GSPADGELDK PVTNSPAQMT VLWPLADNPK LAGGVPGGGD APVRLVDDAL AGSLAAGGRL
DGLLAAYEQA TRGPDPRHTA MRAGSCLAID PDLLVTVQAM TGPYRVSRNP ADPRGPTTAG
TGSDEASAWL ARLRQVAEDS CVVALPFGQV DLEALGRSGE PSLQRAALGN SADVIDSVLG
VKSVRGVTLP TSGLLLGDGA RQSVASDNSA AVVAATAVGA PARGRASANG IVPVGQGIGA
ALFDPYVTTA LAALGGTNGN AERGVSPGAA GSTPQSVTFD LDQESEVSRR QAAVGAVTAA
ALDPTQRYAP PNGWAATTAT DPVATVTGRA SLIVPPQVWA AGPDDAKAIL DAASSLFTAG
IAGPRTFRDV VASAQSAGRD PASAADPWTL RQPTGTVASR VPDRIVTDAA DHVRQVDRLG
AALMPLPKTP LTPRVYTSPL REDAVRALRW SPARAAVDGD ATIRMTAARA SLSAQLSSVN
ILSPGGTYTL ASDKSPLLLA ARNDLPLPIR TVIKVGAPDG FAIDASEVQE LPARGTRQIE
LPTTANDSRQ VAVQLSLRTT SDMPLGEPIQ ISVHSNAYGR PLFWITCAAG VLLVLLSGRR
LWRRFRGRPD RADADRPPAD EHERRLANSY AAHRNPTPPE QPSGTPDPKD P