| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4225 |
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| Symbol | |
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| ID | 9158413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4356484 |
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| End bp | 4358979 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | glycoprotein |
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| Protein accession | YP_003649132 |
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| Protein GI | 296141889 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.553317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCGGT CGGCCCGCCT CCTGTGCGTG CTGACGCTGC TGGTCGCGAT GAGCGGCCTC
GCCGCCCCGA GCCGGGCAGG CATGCCCGAC GCGCAATTCG TCCGGATCGC GATCGCCGAG
ATCACCCCGC AGGTGACCGC CGACTCTCCG AACGATGTGA CGGTGCGCGG CACCATCACC
AACTTCGGTG ACCGCGATGT CAGTGACCTG GAGGTGCGGG TGCAGCGCGC CCCGGCGATC
GCCGCCTCGT CGCAGTTGCG CAGTGACCTG GTCGCCGATA ACAACGTCTA CGACACGATG
GGCCGGTTCC AGCCGGTGGC CTCGGTGCTC AAGCCCGGGC AGAAGTCCGA GTTCACGCTC
ACCATCCCGG TCCGCAGGGA CCGCACCACC ACCGGCCCCA CCCTCGCGAT CGACCGGCCG
GGGGTGTACC CGCTCCTGGT CAACGTGAAT GGTAAACCCG CGTACGGCGG CGTCGCCCGG
CTCGACGATT CGCGCACCAT GCTGCCCGTG CTCGCGCTCC CGGACACCGA CGGTGCCGGC
GGCTCGCCGG CGGACGGCGA GCTCGACAAG CCGGTCACCA ACTCGCCGGC GCAGATGACG
GTGCTCTGGC CGCTCGCCGA CAATCCCAAG CTCGCCGGCG GTGTCCCGGG CGGTGGCGAC
GCGCCGGTCC GACTGGTCGA CGATGCACTC GCCGGTTCGC TTGCGGCAGG CGGACGGCTC
GACGGCCTGC TGGCCGCGTA CGAACAGGCC ACACGTGGCC CCGATCCCCG GCACACCGCG
ATGCGCGCGG GCTCCTGCCT GGCGATCGAC CCCGACCTGC TGGTCACCGT GCAGGCGATG
ACGGGGCCGT ACCGGGTGAG CCGCAATCCG GCGGATCCGC GAGGCCCGAC CACGGCCGGG
ACCGGATCCG ACGAGGCATC GGCGTGGCTC GCCCGGCTGC GCCAGGTGGC CGAGGACTCG
TGCGTGGTGG CACTGCCGTT CGGCCAGGTC GACCTGGAGG CCCTGGGCCG TTCCGGTGAG
CCCTCGCTGC AACGGGCGGC GCTGGGCAAC TCCGCCGACG TGATCGATTC GGTGCTCGGG
GTGAAGTCGG TGCGGGGCGT CACGCTGCCC ACCTCCGGGC TGCTTCTGGG CGACGGTGCG
CGACAGTCCG TGGCGTCCGA TAACTCGGCC GCCGTGGTGG CCGCGACGGC CGTCGGCGCC
CCCGCGCGGG GCCGCGCGAG CGCGAACGGC ATCGTCCCGG TGGGACAGGG GATCGGGGCC
GCGCTGTTCG ACCCGTACGT GACCACGGCG CTGGCCGCGC TCGGCGGGAC CAACGGCAAC
GCGGAACGCG GTGTGAGCCC CGGCGCGGCC GGATCGACAC CGCAGTCGGT GACCTTCGAC
CTCGACCAGG AGTCCGAGGT GTCCCGCCGG CAGGCCGCGG TGGGCGCCGT CACCGCCGCA
GCGCTCGACC CCACCCAGCG CTACGCGCCG CCGAACGGCT GGGCCGCCAC CACGGCAACC
GACCCGGTCG CCACGGTCAC CGGCCGCGCC TCGTTGATCG TGCCGCCCCA GGTGTGGGCC
GCCGGCCCGG ACGACGCCAA GGCCATCCTG GATGCGGCGT CGTCACTGTT CACAGCCGGT
ATCGCCGGCC CGCGCACGTT CCGGGACGTG GTGGCCTCGG CCCAGTCCGC GGGGCGCGAC
CCGGCATCGG CCGCCGATCC CTGGACGCTG CGGCAGCCGA CCGGCACCGT CGCTTCCCGG
GTGCCCGACC GGATCGTGAC CGACGCCGCC GACCACGTCC GTCAGGTGGA CCGGCTCGGC
GCGGCCCTGA TGCCGCTGCC GAAGACCCCG CTCACGCCAC GGGTGTACAC CTCGCCGCTG
CGCGAGGACG CGGTGCGGGC GCTGCGCTGG TCGCCCGCGC GCGCGGCGGT CGACGGTGAC
GCCACCATCC GGATGACCGC CGCACGGGCC TCGCTGTCGG CGCAGCTGTC ATCGGTGAAC
ATCTTGTCGC CGGGCGGCAC CTACACGCTG GCCTCCGATA AGTCGCCGCT GTTGCTGGCC
GCCCGCAACG ATCTGCCGTT GCCGATCCGA ACGGTGATCA AGGTGGGCGC TCCGGACGGG
TTCGCGATCG ATGCCTCCGA AGTGCAGGAG CTACCGGCCC GCGGGACGCG GCAGATCGAG
CTTCCCACCA CCGCGAACGA CTCCCGGCAG GTGGCGGTGC AACTCTCGCT CCGGACCACC
AGCGATATGC CGCTGGGCGA GCCGATCCAG ATCTCCGTGC ACTCGAACGC GTACGGCCGG
CCCCTGTTCT GGATCACCTG CGCGGCGGGC GTGCTGCTGG TGCTGCTGTC GGGTCGCCGG
CTGTGGCGCC GGTTCCGGGG CCGTCCCGAC CGCGCGGACG CCGACCGGCC GCCCGCCGAC
GAGCACGAGC GGCGTCTGGC GAACAGTTAC GCTGCACACC GGAACCCCAC CCCGCCGGAG
CAGCCGTCCG GCACCCCGGA CCCGAAGGAC CCATGA
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| Protein sequence | MIRSARLLCV LTLLVAMSGL AAPSRAGMPD AQFVRIAIAE ITPQVTADSP NDVTVRGTIT
NFGDRDVSDL EVRVQRAPAI AASSQLRSDL VADNNVYDTM GRFQPVASVL KPGQKSEFTL
TIPVRRDRTT TGPTLAIDRP GVYPLLVNVN GKPAYGGVAR LDDSRTMLPV LALPDTDGAG
GSPADGELDK PVTNSPAQMT VLWPLADNPK LAGGVPGGGD APVRLVDDAL AGSLAAGGRL
DGLLAAYEQA TRGPDPRHTA MRAGSCLAID PDLLVTVQAM TGPYRVSRNP ADPRGPTTAG
TGSDEASAWL ARLRQVAEDS CVVALPFGQV DLEALGRSGE PSLQRAALGN SADVIDSVLG
VKSVRGVTLP TSGLLLGDGA RQSVASDNSA AVVAATAVGA PARGRASANG IVPVGQGIGA
ALFDPYVTTA LAALGGTNGN AERGVSPGAA GSTPQSVTFD LDQESEVSRR QAAVGAVTAA
ALDPTQRYAP PNGWAATTAT DPVATVTGRA SLIVPPQVWA AGPDDAKAIL DAASSLFTAG
IAGPRTFRDV VASAQSAGRD PASAADPWTL RQPTGTVASR VPDRIVTDAA DHVRQVDRLG
AALMPLPKTP LTPRVYTSPL REDAVRALRW SPARAAVDGD ATIRMTAARA SLSAQLSSVN
ILSPGGTYTL ASDKSPLLLA ARNDLPLPIR TVIKVGAPDG FAIDASEVQE LPARGTRQIE
LPTTANDSRQ VAVQLSLRTT SDMPLGEPIQ ISVHSNAYGR PLFWITCAAG VLLVLLSGRR
LWRRFRGRPD RADADRPPAD EHERRLANSY AAHRNPTPPE QPSGTPDPKD P
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