| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4180 |
|---|
| Symbol | |
|---|
| ID | 9158368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 4303221 |
|---|
| End bp | 4304168 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2236 |
|---|
| Protein accession | YP_003649088 |
|---|
| Protein GI | 296141845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA GCGCAGGGCG CATCGCACCC GCACCTGTCG AGCCGGCGAC GGCATCGGCG
GCGGTGGCGA ACGCCCCACG GGTCGATCCG GTGGCCGCGG GATACCGCAT ACCGATCGCC
ACGCCGGCTC GTCCGGGGCA CGTGCTCACC ACACTCCGGG ACGCCATGGT CGCCCCCTCG
TCCGCCGCCG GGCCCGCCAA CGTGGTGATG CAGTTGATCG ACCCGCCGGT CGCCTACGGC
GTGATGGAGT CGCCGGTGGA ATCCGGTGCG CTCTATAAGC ATCCGATCAA GCGCACCCGC
ACCACCTTCA CCTACCTCGC CGTGGCCGTG CTCGGCACCC AGGACGACAA GGAGCGCTAT
CGCGAGGCGG TCAACACTGC GCACCGGCAG GTGCGCAGCA CCGAGAAGAG CCCGGTGAAG
TACAACGCGA TGGACCGCAA CCTGCAGCTG TGGGTGGCGA TGTGCCTGTA CGTGGGATTC
GAGGACACCC ACAAGCTGCT GCGCGGCCCG ATGTCCCCGG AGCAACGGGC CCTGTTCTAC
CGCGACGCGG CGCCGCTGGG CACCACGCTG CAGGTGCATC CCGATCAATG GCCCGCGACA
CCCGAGGAGT TCGACGCCGC GTGGGTCGAA CTGTGCGATA CCAAGATCGC GCCGACGCCG
GAGACCCGGG ACTATCTCCG CCAGCTCGTC GATCTCACCT TCGTCGGCAC GGTACCCGGA
CCGTTCAAGG CCTTCTCCCG CTTCCAGACC GCGGGCTTCC TCGCGCCGAA GTTCCGTGAG
GCGATGGAGA TCACCTGGAC GCCGCGGCAT CAGCGCGCGT TCGACGCCTT CTGGCGTCTG
GTGGGAACGG TCAATCGGTT CCTCCCGGTG GCCCTCACCC GGTTGCCGTA CGAGCTCCTG
CTCGTGGACA TGCGCACCCG GGCCAAGCTC GGCCGTCCCC TGGTCTGA
|
|---|
| Protein sequence | MTASAGRIAP APVEPATASA AVANAPRVDP VAAGYRIPIA TPARPGHVLT TLRDAMVAPS
SAAGPANVVM QLIDPPVAYG VMESPVESGA LYKHPIKRTR TTFTYLAVAV LGTQDDKERY
REAVNTAHRQ VRSTEKSPVK YNAMDRNLQL WVAMCLYVGF EDTHKLLRGP MSPEQRALFY
RDAAPLGTTL QVHPDQWPAT PEEFDAAWVE LCDTKIAPTP ETRDYLRQLV DLTFVGTVPG
PFKAFSRFQT AGFLAPKFRE AMEITWTPRH QRAFDAFWRL VGTVNRFLPV ALTRLPYELL
LVDMRTRAKL GRPLV
|
|---|
| |