Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4152 |
Symbol | |
ID | 9158340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 4281820 |
End bp | 4282464 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003649060 |
Protein GI | 296141817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACCTCC GCAGATTTCT CGACGGTCGC GGGGAGCAGC TCGCTTTTCT CACCTACCAG CACGCCTCGC TGGTGATCCA GTGCGTCCTG GCCGCGGTGG TGATCGCGCT GGTTCTGGCC GCCGCGGTGT ACCGGTCCCG CGCCGGGGCC GCGATCGCCA CGGCGATCGC CTCGGTGGGA ATGACGATCC CCTCGCTCGC CCTGCTCGCA CTGCTGCTGC TCGTCTTCGG CCTCGGGGTG GCCCCGTCGG TGACGATGCT CGGCTTCTAC GCCACCCTCC CGATCCTCAC CAGCGCCATC GTCGGGTTGC GTGCGGTGCC GCCGAACATC GTGGAGGCGG CCCGGGGCAT CGGCATGCCG CGCTGGCGGG TGCTCGCCAC CGTCGAACTG CCGCACGCCT GGCCCGTGAT CCTCACCGGT ATCCGGGTGA GCACCCAGCT CGTGGTGGGC GTCGCCACCG TGGTGGCGTA CGTGTTGGGG CCCGGCCTGG GCTCGCTCAT CTTCTCCGGC CTCGCCCGCC TCGGCGGCGC CGGCGCCCTC GAATCCGCCC TCACCGGCAC GGTTCTCGTG GTGATCGTCG CGCTCGTGCT CGACGGCCTG CTGGTGCTGT TGGGCCGGTT CACCGTCTCG AAGGGGCTGG TATGA
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Protein sequence | MDLRRFLDGR GEQLAFLTYQ HASLVIQCVL AAVVIALVLA AAVYRSRAGA AIATAIASVG MTIPSLALLA LLLLVFGLGV APSVTMLGFY ATLPILTSAI VGLRAVPPNI VEAARGIGMP RWRVLATVEL PHAWPVILTG IRVSTQLVVG VATVVAYVLG PGLGSLIFSG LARLGGAGAL ESALTGTVLV VIVALVLDGL LVLLGRFTVS KGLV
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