Gene Tpau_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4082 
Symbol 
ID9158269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4208169 
End bp4208951 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID 
Productprotein of unknown function DUF81 
Protein accessionYP_003648991 
Protein GI296141748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.188024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGATA TCGCAACCAC GACCCTGCTG CTTCTCCTGC TGGCCGCGTT GGCCGCGGGC 
TGGGTCGACT CCGTGGTCGG CGGCGGCGGG CTGATCCAGC TCCCGGCGCT TCTGATCGCC
TTTCCCACGG CCGCGCCGAT CCACCTGCTC GCCACCAACA AGATGGCCTC CATCGCGGGC
ACCACCACCA GCAGCATCAC GTTCTGGCGG CGGGTCAAGC CCGATGCGCG CACCGCGATC
GCCCTCGCGC TGCCCGCGTT CGCGGGAGCC GTCGCGGGCT CGCTCATCGC CTCGCACATC
CCGCGCGCGG CGTTCAACCC GATCATCCTC GCCGCGTTGA TCGTGGTGTT CGTCTACACG
CTGCGTCAGC CGGACCTCGG TGGCAGCACC GCGCTCCGGT TCGCCGGGCA CCGCCACCTC
GTCGCGGCCG GGATCGCCGG GTTCGCGATC GGCGTCTACG ACGGTGCGCT CGGTCCGGGG
ACCGGCTCCT TCTTCGTCTT CGCGATGGTC GGCCTGATGG GCTACGCGTT TCTGGAGGCC
TCGGCCAAGG CGAAGGTGGC CAATCTCGCC ACCAACCTCG CCTCGCTCGT GGTCTTCCTA
CCTCAGGGCG CGGGGTTCTG GAAGCTCGGC ATCGCCATGG CGTGCGCCAA TGTGGCGGGC
GGGTATCTCG GCGCGCGGAC CGCCGTCGCC AAGGGCAGTG GCTTCGTCAA GATCGTCTTC
CTGGTGGTCG TCTCCGCGTT CATCTGCAAG ATCGGGTACG ACGTTGTGCG CCAGTTCACG
TAG
 
Protein sequence
MPDIATTTLL LLLLAALAAG WVDSVVGGGG LIQLPALLIA FPTAAPIHLL ATNKMASIAG 
TTTSSITFWR RVKPDARTAI ALALPAFAGA VAGSLIASHI PRAAFNPIIL AALIVVFVYT
LRQPDLGGST ALRFAGHRHL VAAGIAGFAI GVYDGALGPG TGSFFVFAMV GLMGYAFLEA
SAKAKVANLA TNLASLVVFL PQGAGFWKLG IAMACANVAG GYLGARTAVA KGSGFVKIVF
LVVVSAFICK IGYDVVRQFT