| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3988 |
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| Symbol | |
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| ID | 9158170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4116808 |
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| End bp | 4118676 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003648898 |
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| Protein GI | 296141655 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCTG CAGCCGATTC CTACACCTCC GGCGTATCGA AGATCTCCAC TCCGGCCGGC
CCGCGCAACC CCGGGCAGCC CGCGTGGAAC CCCCAGCGTT CCTCGGCCAT GCCGAACCAC
CGGTACCGCC CGTTCGCCGA CGAGGTCGAA CAGATCTCCC TGCCTGATCG CACCTGGCCC
GACAACGTCG CCGACACCGC GCCCCTGTGG TGCGCCGTGG ACCTGCGCGA CGGCAACCAG
GCGCTGATCG ATCCCATGAG TCCCGCCCGC AAGCGGCGCA TGTTCGACCT CCTGGTTCGT
ATGGGCTACA AGGAGATCGA GGTCGGCTTC CCCTCTGCCA GCCAGACCGA CTTCGACTTC
GTCCGCGAGA TCATCGAAGA CGGTGCGATC CCCGACGACG TCACCATCCA GGTATTGGTG
CAGTGCCGTG ATGAACTGAT CGAGCGCACC TTCGAGGCGT GCCAGGGCGC GAAGAACGTG
ATCGTGCACT TCTACAACTC CACCTCGGTG TTGCAACGCC GCGTGGTCTT CCGCGCCGAT
AAGGCTGCGA TCAAGAAGAT CGCCACCGAC GCCGCCCACA AGGTGCTGGA GGAACAGAAG
AAGTACCCCG ACACCGCCTG GCGCTACCAG TACTCCCCCG AGTCGTACAC CGGGACCGAG
CTCTCCTTCG CCAAGGAGGT CTGCGACGCG GTCACCGAGA TCATCGCTCC CACACCGGAG
AACCCGATGA TCCTGAACCT ACCCGCCACC GTCGAGATGG CGACCCCGAA CGTGTACGCC
GATTCCATCG AGTGGATGAG CCGCAACCTG GATCGACGCG ATTCGGTGAT CCTGTCGCTG
CACCCGCACA ACGACCGCGG CGAGGGCGTG GCGGCTGCCG AGCTCGGCTA CCTGGCCGGC
GCCGACCGCA TCGAGGGCTG TCTGTTCGGC AACGGTGAGC GCACCGGCAA CGTCTGCCTG
GTGACCCTGG GGCTGAACAT GTTCAGCCGG GGCATCGATC CGCAGATCAA TTTCGCCGAC
ATCGACGAGA TCCGCCGCAC CGTCGAGTAC TGCAATCAGT TGCCGGTACC CGAGCGGCAC
CCGTACGGCG GCGATCTGGT GTACACCGCG TTCTCCGGTA GCCATCAGGA CGCGATCAAC
AAGGGCCTCG ATCAGATGAA GATCGACGCC GACGAGGCCG ACAAGGACGT CGACGACATC
CTGTGGCAGG TCCCCTACCT GCCGATCGAC CCGAAGGATG TGGGTCGCTC CTACGAAGCC
GTGATCCGCG TCAACAGCCA GTCCGGCAAG GGCGGTGTCG CCTACATCAT GAAGTCCGAC
CACGGCCTGG CGTTGCCCCG CCGCCTGCAG ATCGAGTTCA GTCAGTCGGT GCAGAAGATC
ACCGATGGCG AGGGCGGCGA GGTGACGCCC AAGGAGATGT GGGATGTGTT CGCCGGCGAG
TACATCGATC CGATCCTGCC GCTCGAGCGC ATGCGCCAGA AGGTCACCGC CTCGGAGATC
GACGGAGCTG TTGACCGTAT CGAGGCAGTG GTCAAGGTCG AAGGCAAGGA GCAGGAGATC
TCGGGCGAGG GCAACGGCCC GCTCGCGGCC TTCGTCGACG CCATCGGCAC CGTGGGCTTC
GATGTGCGGG TGCTCGACTA CAGCGAGCAC GCCCTGTCGG CCGGTGACGA CGCGCAGGCC
GCTGCCTATG TCGAGGCCAT CGTGCGTGTG GGCGACGAGG ATCGCACCGT GTGGGGCGTG
GGCATCGCAC CGTCGATCAC CACGGCCTCT CTGCGCGCCG TGGTCTCCGC GGTCAACCGC
GCGCACGGCA GCGTACGAGC GAGCCAGGAA GCCGTCGGAG AGGCGTCGAC GCGGACCTGG
GCTCCGTAA
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| Protein sequence | MSPAADSYTS GVSKISTPAG PRNPGQPAWN PQRSSAMPNH RYRPFADEVE QISLPDRTWP
DNVADTAPLW CAVDLRDGNQ ALIDPMSPAR KRRMFDLLVR MGYKEIEVGF PSASQTDFDF
VREIIEDGAI PDDVTIQVLV QCRDELIERT FEACQGAKNV IVHFYNSTSV LQRRVVFRAD
KAAIKKIATD AAHKVLEEQK KYPDTAWRYQ YSPESYTGTE LSFAKEVCDA VTEIIAPTPE
NPMILNLPAT VEMATPNVYA DSIEWMSRNL DRRDSVILSL HPHNDRGEGV AAAELGYLAG
ADRIEGCLFG NGERTGNVCL VTLGLNMFSR GIDPQINFAD IDEIRRTVEY CNQLPVPERH
PYGGDLVYTA FSGSHQDAIN KGLDQMKIDA DEADKDVDDI LWQVPYLPID PKDVGRSYEA
VIRVNSQSGK GGVAYIMKSD HGLALPRRLQ IEFSQSVQKI TDGEGGEVTP KEMWDVFAGE
YIDPILPLER MRQKVTASEI DGAVDRIEAV VKVEGKEQEI SGEGNGPLAA FVDAIGTVGF
DVRVLDYSEH ALSAGDDAQA AAYVEAIVRV GDEDRTVWGV GIAPSITTAS LRAVVSAVNR
AHGSVRASQE AVGEASTRTW AP
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