| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3913 |
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| Symbol | |
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| ID | 9158094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 4029033 |
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| End bp | 4029983 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003648824 |
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| Protein GI | 296141581 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACA ATCAGACCTA CCCCGGACAG GAACGTTTCG TCGCCGCTGC GGACGACGTG
GTGGTCGGCG CGATCGACGC CGTCGATCAG GATGTGGAGC CGGCAGGCTT CTGGAAGACG
GCGTGGTTGC AGCTCAAGGT CAAACCGCTG TTCTGGGTCT GCATGGCTTT GCTCACGCTG
ATCCTGCTCG TAGTGCTCTT CCCCGGTGTG TTCGCCTTCG GGAAGGATCC GCACGAGGCC
TCGCTGGACC GGTCGCTGCT GCCGCCCAGT GGTGAGCACT GGTTCGGCAC CGACCTGCAG
GGCTACGACA TCTACGCCCG CACCATCTAC GGTGCCCGCG CTTCGGTACT CGTCGGTGTG
CTGACCACAC TGGCCGTGGT CGTGATCGGT GGCCTCCTCG GCGCCACCGC CGGATTCTTC
GGCGGCTGGC TGGATTCGGT GATCGCCCGC CTATCGGATG TCTTCTTCGG CGTTCCGCTC
ATGCTGGCCG CGGTCGTGGT GATGCAGATG GTCACCGAAC GCACAGTTCT GTCGGTGGTC
TTCGTTCTCA CCATCTTCAG TTGGCCGCAG ATCGCCCGCA TCGCGCGCTC GGCAGCCATC
TCGGTTCGCA ACGAGGAGTT CATCACGGCG TCGAAATCGT TGGGCGCCTC GAAGATCCGT
ACCCTGTTCA CCCACGTGAT TCCGAACTGC CTCGGGCCCG TGATCGTGGT CGCCACCGTG
GCGCTCGGTA TCTACATCGT CACCGAGGCC ACACTCTCCT ACCTCGGCAT CGGTCTCCCG
TCGAGCACCG TGTCCTGGGG CATGGACATC TCCGACGGCC AGACTCTGCT CCGCGAAGGC
ACACCGATCC TGTTCTTCCC CGCGTCCGCC CTGGCGCTCA CCGTGCTCAC CTTCATGATG
CTCGGTGACG TCCTGAGCGA CGCACTCGAT CCGAAGGCGA GGACCCGCTG A
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| Protein sequence | MPDNQTYPGQ ERFVAAADDV VVGAIDAVDQ DVEPAGFWKT AWLQLKVKPL FWVCMALLTL
ILLVVLFPGV FAFGKDPHEA SLDRSLLPPS GEHWFGTDLQ GYDIYARTIY GARASVLVGV
LTTLAVVVIG GLLGATAGFF GGWLDSVIAR LSDVFFGVPL MLAAVVVMQM VTERTVLSVV
FVLTIFSWPQ IARIARSAAI SVRNEEFITA SKSLGASKIR TLFTHVIPNC LGPVIVVATV
ALGIYIVTEA TLSYLGIGLP SSTVSWGMDI SDGQTLLREG TPILFFPASA LALTVLTFMM
LGDVLSDALD PKARTR
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