Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3823 |
Symbol | |
ID | 9158003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3947369 |
End bp | 3948358 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003648737 |
Protein GI | 296141494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGTAG CGGTCACCGG CGCGGCCGGA TTCGTCGGCG GGAACCTCCT GCAACTGCTC GTCGACCAGG GCCACGACGT GGTCGCGATC GACCGGATCC GGTCGCCGCA CGCGCCCGAG GGCGTGCGCT GGGTCCCAGC GAGCGTTCTC GATCGGGAGG CGATGCGCGA GGCGCTCGCC GACGTCGAGG TGGTGTACCA CCTGGTCGCA ATGATCACGC TCCGGATGCA GGACGACGCC GCCTGGCGGC TCAACACTCA GGGCGTGGCG ACGGTGGCCC GCGCGGCGCT CGACACGGGG GTGCGGAAGA TGGTGCACCT GAGTTCGATC CATGCCTTCG ATCAAGACCT GGTGGACGTG ATCGACGAGT CCGCGCCGCG CTCCGAGCGG CCCGAGATCC CCGTCTACGA TCGGTCCAAG TGGGCGGGCG AGCAGGAGCT CCGCAAGGTG ATCGACGACG GTCTCGACGC CACCGTCTGC AACCCCACGG GCGTCTGGGG CCCGGCCGAT CACGGCGCCG CGCTCTCGCG CCTCAATCGA CTGGCACACA CCGCGGCGCG CGGCCGAATG CCCGTCTTCG TCTCGAAGGC CGGGTTCGAT CTGGTGGACG TGCGCGATGT TGCCGCGGGC GTCATGCTCG CCGCTGAAAA GGGACGCACA GGCGAGAACT ACCTGCTGGG GGGCCAGTTC ACTCCGATCA TCGACGCGAT GCGTCTTTCC GCCGCGGCCG CCGGCAGAAC CGGCCCGCAG GTCGGTGTTC CGATCGGCGC GCTCGCGGCG ATCATGCCGC TACTCGAGCC GATCAATGCC CGCCTGGGCT CGGACGTGCT GTCCAAAGCA GCTCTGGGGC CGCTGTTCGC CTCACCGCTG GTGGACATCA CCAAGGCGCG TAACGAACTC GGTTACGCGC CGCGACCGAT CGCGGATACC GCGGCGCAAC TGGTCGAGTT CTTCACGCAG AGCGGCCGAC TCCGCAGCCG GCGGACTTAA
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Protein sequence | MRVAVTGAAG FVGGNLLQLL VDQGHDVVAI DRIRSPHAPE GVRWVPASVL DREAMREALA DVEVVYHLVA MITLRMQDDA AWRLNTQGVA TVARAALDTG VRKMVHLSSI HAFDQDLVDV IDESAPRSER PEIPVYDRSK WAGEQELRKV IDDGLDATVC NPTGVWGPAD HGAALSRLNR LAHTAARGRM PVFVSKAGFD LVDVRDVAAG VMLAAEKGRT GENYLLGGQF TPIIDAMRLS AAAAGRTGPQ VGVPIGALAA IMPLLEPINA RLGSDVLSKA ALGPLFASPL VDITKARNEL GYAPRPIADT AAQLVEFFTQ SGRLRSRRT
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