Gene Tpau_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3787 
Symbol 
ID9157967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3908549 
End bp3909553 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_003648704 
Protein GI296141461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG TGGTCACCGG CGGTGCCGGT TTCATCGGCG CCAACTTCGT CCGCCGCACC 
GTCGCCACCC GGCCCGATGT GGCCGTCACC GTGCTCGACG CGCTCACCTA TGCCGCCAAC
GAGTCCTCGC TCGACGACGT GCGCGACCGG GTCGACTTCG TCAAGGGCTC GATCGTGGAC
CCCGCCGTGG TCGATGAGTT GGTCTCGAGC GCGGATGCGG TGATCAATTT CGCCGCCGAT
ACCCACAACG ACAACTCGCT GTCGGATCCA TGGCCGTTCC TCGACACCAA TATCCGCGGC
ACCGCAGTGC TGCTCGATGC CGTGCGCCGG CACGACGTGC GACTGCACCA CATCTCCACC
GACGAGGTCT TCGGCGACCT GCCCCTCGAC AGCCCCGAAC GGTTCACCGA GGACACCCCC
TACCGTCCGT CGAGCCCGTA CTCCGCGTCG AAGGCGTCCT CGGATCACCT GGTGCGCGCC
TGGGTCCGCA GCTTCGGCGT GCGGGCAACC ATCTCCAACT GCTCCAACAA CTACGGTCCG
TATCAGCACA TCGAGAAGTT CATCCCCCGG CAGATCACCA ACATCCTCAG CGGTATCCGG
CCGAAGCTGT ACGGCACCGG GGTCAATGTC CGGGACTGGA TTCACGTCGA CGACCACAAT
GACGCGGTCT GGGCGATCCT CGACCGGGGC GCGATCGGCG AGACCTATCT CATCGGCGCC
GACGGCGAAC GATCCAACCG CGACGTGCTC GCTCTGATCC TGGAGGTCAT GGGGCGGCCC
ACGGACGACT TCGACCACGT CACCGACCGC GCCGGGCACG ACCTGCGGTA CGCCATCGAC
TCCGCGAAGA TCCGTCGCGA GCTGGACTGG GAACCGGTGC ACGCCGATTT CGCGGCAGGC
CTCGCCGCGA CTGTCGAGTG GTACGCCGCG AACCGGTCGT GGTGGGAGCA GGCCAAGGAT
GGGGTCGAGG CCGGATACGC GCGCCGCGAG GGCACCGGGG TGTGA
 
Protein sequence
MQIVVTGGAG FIGANFVRRT VATRPDVAVT VLDALTYAAN ESSLDDVRDR VDFVKGSIVD 
PAVVDELVSS ADAVINFAAD THNDNSLSDP WPFLDTNIRG TAVLLDAVRR HDVRLHHIST
DEVFGDLPLD SPERFTEDTP YRPSSPYSAS KASSDHLVRA WVRSFGVRAT ISNCSNNYGP
YQHIEKFIPR QITNILSGIR PKLYGTGVNV RDWIHVDDHN DAVWAILDRG AIGETYLIGA
DGERSNRDVL ALILEVMGRP TDDFDHVTDR AGHDLRYAID SAKIRRELDW EPVHADFAAG
LAATVEWYAA NRSWWEQAKD GVEAGYARRE GTGV