| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3777 |
|---|
| Symbol | |
|---|
| ID | 9157957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3899415 |
|---|
| End bp | 3900239 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Pyoverdine biosynthesis protein |
|---|
| Protein accession | YP_003648694 |
|---|
| Protein GI | 296141451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCTGG CAGCGATCGG GCACCGGATC GAGCGGAACG AGCCGATCGA TTTCGTGCTC
CCCGCCTTTC CGTGCAAGTC GCCGAACCCC GACAAGGTGG CGGGACACCT GCCCGACGAG
GGCGAGCGTC TCGCGCTGCG CAACCTGAAC GCCTGGTGCG AGGCTATCGG CCGCATCCAT
CCGCCGGGGG CTCGCGTCAT CGTGTGCTCC GACGGCCACG TTTTCACCGA GGTGATCGGC
GTCTCGGACA GCGTGGTCAC CGCGTACAAC GCAGCACTTC GCGACATGAT CGAGGCCGAG
GGGCTCACCC GGCTCACGAC GTTCGGCCTC GATTCCATCT GGGAGAATGA CGATTTCGCA
GCTAAACGCG AGCGACTGGA GCAGGAGTGG GCGCCGCCGC TCGTCGACGT GCGCGCCGAT
GTACTCGCCG AGCCCCAGAC CGCGCGCATG CTCCGAGGGA TGACGAGGTT CATGGTGGGC
GACACCGCGC AATGGTCGGG ATCACGGGCG CAATTGCAGC GCACGGCCAA GCGGAAGGCC
TACGACCTCC TGCGCCTGAG TCGCGCTTGG GGCGACCTCC TGGCCCACGA GAATCCCGAT
GCCGTGCGAC TGTCCATCCA TCCGCAGCCG CCCGGTGCGG AGAAGTTCGG CATCCGGCTC
ATCGACGCCG CGGACGGCTC GTGGGCGACG CCCTGGCATG CGGTACTCGT CTATCGCAGC
GACGGACGCC CCGCGCTCGT ACCGCACCGC GAGGCGCGTG ACCGGTTCCA GCCCGTGATC
ACGCGCGGCC GGATCAGCCA CTACGTCGAG GCCTTGACAA CATAG
|
|---|
| Protein sequence | MQLAAIGHRI ERNEPIDFVL PAFPCKSPNP DKVAGHLPDE GERLALRNLN AWCEAIGRIH
PPGARVIVCS DGHVFTEVIG VSDSVVTAYN AALRDMIEAE GLTRLTTFGL DSIWENDDFA
AKRERLEQEW APPLVDVRAD VLAEPQTARM LRGMTRFMVG DTAQWSGSRA QLQRTAKRKA
YDLLRLSRAW GDLLAHENPD AVRLSIHPQP PGAEKFGIRL IDAADGSWAT PWHAVLVYRS
DGRPALVPHR EARDRFQPVI TRGRISHYVE ALTT
|
|---|
| |