Gene Tpau_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3339 
Symbol 
ID9157513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3439691 
End bp3440836 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003648262 
Protein GI296141019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGCA CCGTGAGAAC CGGTGCCGCG TACCTCGCTG CGCTCGTTGT GACCACCGGA 
TTCGCAGCTC CGGCTCTAGC GCAGCCGATC TCGCCCGCTG GACGCCAGTC CGTCCAGCGG
GCGCTCGACG CAATGGTCTC CGCGGGCTAC CCCGGGGCGC AGGTCGTCAT CACCGAACGC
GGACGGGACT GGATCGCGAG CGCCGGCGTC GGCGACGCCG ACCGGCGCAC CCCGTTCCCC
GCCGACGGTT ACGTCCGGAT CGGCAGCAAT ACCAAGGCCT ACGTCGCCGC GGTGGTGCTG
CAACTGGTCG CCGAGAACCG CATCCGGCTC GATGCGACGG TCGACAGCAT CGCCCCCGGG
ATGCTCACAC CGGGGCCTCC GGCCCCCGAC GGCAGCAGGG TGGACGCGAC GCGGATCTCC
GTCCGCGACC TGCTGCAGCA CACTTCCGGT CTGCCCGACC ATCTCGATCT CCCGGAACTC
GAGTCCGACG ATGCGGCGAG CACGACCTAC CAGCCCGCCT ACCTGGTACG GCGGGCCCTG
GCTACGCTCG CGCCGCGATT CGCTCCCGGC ACGCGCGCCG AGTACAGCAA CATCAACTAC
GTCGTGCTGG GAATACTGAT CGAGAAGACC ACCGGGAGAA GTCTTTCCGA CGAGATCCGC
ACCCGCATCC TCGAACCGCA GGCGCTGCGG AAGACCTACT TCCCCACACC CGGCGACGCC
GCGGTCCGCG CGCCGCACGC CATCGGCTAT GCCGTGGAGA ACGGGCGGCG GGCCGATATC
ACCTCGTTCG ATCCGTCCTG GGCGGGTGCA GCGGGGGCGA TGATCGCCAC CCCGTCGGAT
GTGAACCGAT TCTTCCTCGC CCTCCAGAAC GGGAAGGTGA TCACGGCGTC GCAGTTCACC
GAGGCGCGAC GGGCCCCGCG ACCGCTCGTC AATCGTGACG GGCTGCGATA CGGCCTCGGC
CAGGCGGAAC TCTCCACGCC GTGCGGCACC GTCTGGGGGC ACGGCGGTTC CATACCCGGC
TACCGGACCT ATAACGGAGC CACATCCGCG CGCGCGGTGA CCGTGGTCGC GAACCAGCAA
CCCGCCACCC AGGCGCAGAA AGACGCGATC GCGGCGGCGT TCGGCGCTGC GATCTGTGCC
CGGTAG
 
Protein sequence
MNRTVRTGAA YLAALVVTTG FAAPALAQPI SPAGRQSVQR ALDAMVSAGY PGAQVVITER 
GRDWIASAGV GDADRRTPFP ADGYVRIGSN TKAYVAAVVL QLVAENRIRL DATVDSIAPG
MLTPGPPAPD GSRVDATRIS VRDLLQHTSG LPDHLDLPEL ESDDAASTTY QPAYLVRRAL
ATLAPRFAPG TRAEYSNINY VVLGILIEKT TGRSLSDEIR TRILEPQALR KTYFPTPGDA
AVRAPHAIGY AVENGRRADI TSFDPSWAGA AGAMIATPSD VNRFFLALQN GKVITASQFT
EARRAPRPLV NRDGLRYGLG QAELSTPCGT VWGHGGSIPG YRTYNGATSA RAVTVVANQQ
PATQAQKDAI AAAFGAAICA R