Gene Tpau_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3304 
Symbol 
ID9157478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3396249 
End bp3397793 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content69% 
IMG OID 
Productphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 
Protein accessionYP_003648228 
Protein GI296140985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA TCCCCATCAA GCGCGCTCTG ATCAGCGTGT ACGACAAGTC GGGTCTGGTG 
GAACTCGCCA CCGGCCTGGC GCAGGCGGGG GTGGAGATCG TCTCGACCGG CTCGACGGCG
CGCGTCATCG CCGACGCCGG CGTGCCCGTG ACCCGCGTCG AGGAGGTGAC CGGCTTCCCC
GAGTGCCTCG ACGGCCGGGT CAAGACGCTG CACCCGAAGA TCCACGCGGG CATCCTCGCC
GACACCCGGC TGCCCGAGCA CCTCGAGCAG CTGCGCGAGC TGAACGTGAA GAAGTTCGAG
CTGGTGGTGG TGAACCTCTA TCCCTTCAGC GACACCGTTG CCTCCGGCGC CACCGAGGAC
GAGTGCATCG AACAGATCGA CATCGGCGGA CCGTCGATGG TGCGCGGCGC GGCGAAGAAC
CACCCGTCGG TCACGGTGGT GGTCTCGCCT GATGACTACA CCGCCGTGAC CGACCGGGCG
CGCACCGGCT TCTCGTTGGA GGAGCGGAAG CAGTTCGCCG CGAAGGCCTT CCGGCACACC
GCCGACTACG ATGTGGCCGT TGCGTCCTAT CTGACCAATG TGGTCGCTCC GGAAGCCGAC
ACCGGCTTCC CGGCGTGGAT GGGCGGAACC TGGAACCGCG ATGCCGTGCT GCGGTACGGC
GAGAACCCGC ACCAGGGTGC CGCGCTGTAT GTGGGCGGCT CCACGGCCGG ACTCGCGCAG
GCGCAGCAGT TGCACGGCAA GGAGATGAGC TACAACAACT ACACCGACGG TGACGCCGCG
TGGCGCGCCG CCTACGACTT CCGCGAGCCC GCCGTCGCGA TCATCAAGCA CGCCAACCCG
TGCGGTATCG CCATCGGCAA GGACGTAGCG CAGGCGCATC GCAAGGCGCA CGCCTGCGAC
CCGGTGTCGG CGTACGGCGG CGTGATCGCC GCCAACCGCG AGGTGAGCCT GGAGATGGCC
GAGCAGGTCT CGGAGATCTT CACCGAGGTG ATCATCGCCC CGGCCTACGC CGATGGCGCC
GTTGCGGTGC TGCAGCGCAA GAAGAACATC CGCGTGCTGC TCGCCGAGCC CCCCGTGCTC
GGTACCGAGA TCAAGCAGAT CACCGGCGGC CTGCTGGTAC AGCGCTCGGA TGCGATCGAC
GCCGAGGGTG ATGACCCCGC GAACTGGACC CTGGCCACCG GCGAGCCAGC CGACGAGGCC
ACCCTCGCGG ACCTCGAATT CGCCTGGCGC GCCTGCCGGG CGGTGAAGTC CAACGCGATC
CTGCTGGCCT CGCGCGGCGC CTCCGTCGGT GTGGGCATGG GCCAGGTGAA CCGCGTGGAC
TCCGCACAGC TCGCGGTCAA GCGCGCCGGC GACCGAGTGC TCGGGTCGGT GGCCGCATCC
GATGCCTTCT TCCCGTTCCC CGACGGCCCG CAGATCCTCA TCGACGCGGG CGTCAAGGCG
ATCGTGCAGC CCGGCGGCTC CATCCGCGAT AAGGAGGTCG TCGAGGCGGC CGCCGAGGCC
GGCGTGACGA TGTACTTCAC AGGTACCCGG CACTTCTTCC ACTGA
 
Protein sequence
MSNIPIKRAL ISVYDKSGLV ELATGLAQAG VEIVSTGSTA RVIADAGVPV TRVEEVTGFP 
ECLDGRVKTL HPKIHAGILA DTRLPEHLEQ LRELNVKKFE LVVVNLYPFS DTVASGATED
ECIEQIDIGG PSMVRGAAKN HPSVTVVVSP DDYTAVTDRA RTGFSLEERK QFAAKAFRHT
ADYDVAVASY LTNVVAPEAD TGFPAWMGGT WNRDAVLRYG ENPHQGAALY VGGSTAGLAQ
AQQLHGKEMS YNNYTDGDAA WRAAYDFREP AVAIIKHANP CGIAIGKDVA QAHRKAHACD
PVSAYGGVIA ANREVSLEMA EQVSEIFTEV IIAPAYADGA VAVLQRKKNI RVLLAEPPVL
GTEIKQITGG LLVQRSDAID AEGDDPANWT LATGEPADEA TLADLEFAWR ACRAVKSNAI
LLASRGASVG VGMGQVNRVD SAQLAVKRAG DRVLGSVAAS DAFFPFPDGP QILIDAGVKA
IVQPGGSIRD KEVVEAAAEA GVTMYFTGTR HFFH