Gene Tpau_3298 details

Gene Information

• Locus tag: Tpau_3298
• ID: 9157472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3390046
• End bp: 3392037
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 70%
• Product: von Willebrand factor type A
• Protein accession: YP_003648222
• Protein GI: 296140979

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGACA GACCGTCTAT GGCTAGAGGC TCGCGTCGGC GCCATCTGGC GCAGTACCGC 
CGCTATACCG GCGGGCCGGA TCCCCTGGCG CCGCCGGTCG ATGTGCGCGA TGCTCTCGAT 
GAGATCGGCC GCGACGTGAT GAACGGCGTC TCGCCGCGCC GCGCCCTGCA GGAGTACCTG 
CGGCGAGGCA GCGCGAACCG CCGCGGCCTC GACAAACTCG CCGAGGCCGC CAACCGCCGG 
CGCCAGGAAC TGTTGCACCG CAACAATCTG GGCAAGACCT TCGAGGACAT CCGCGCACTG 
CTCGACGAGG CGGTGCTCGC CGAGCGCAAG GAGCTGGCGC GCGCCCTCGA CGACGACGCC 
CGGTTCCAGG AGATGCAGAT CAACGATCTG CCCCCGTCCG CGGCGCAGGC CGTGCGCGAA 
CTCGCCGACT ACCCGTGGCG CTCGCCCGAA GCGGCGCAGA AGTACGAGCA GATCCGGGAC 
CTGCTCGGCC GGGAGCTGCT CGACCAGCAG TTCGCCGGAA TCAAGCAGGC ACTCGAGGGC 
GCGACCGACG AGGACCGCGC GGCGATCCAG AAGATGCTCG ACGACCTGAA CACTCTGCTG 
GACAAGCACA ACGCGGGCAC GGCGACGCAG AACGACTTCG AGGAGTTGAT GGCCGAGCAC 
GGTCAGTACT TCCCGGAGAA CCCGCGGAAC ATCGACGAGC TCATCGATGC CCTCGCGCGG 
CGAAGCGCCG CGGCACAGCG GCTCTACAAC AGTCTCAGCC CGGAGCAGCG CGCCGAACTG 
GAGGAGCTGT CGCAGGCCGC CTTCGGTTCG CCGCAGCTCT CCCAGGCGCT CGGCGATCTC 
ACCAGCAAGT TGCAGCAGGC CCGGCCCGGG GAGGACTGGA ACGGTAGCCA GGAGTTCGAC 
GGTGAGCAGG GCATGGGTCT CGGCGACGCC ACGCAGGCCA TGCAGGACAT CGCCGATCTG 
GAATCCCTTG CCGAACAACT GAGTCAGCAG CACAACGGAG CCGCACTCGA CGACATCGAC 
CTCGACGCCT TGCAACGCCA GCTCGGCGAC GAGGCCGTCG CCGACGCCCG CACCCTCGCC 
GAACTGGAGA AGGCGCTCAA GGACCAGGGC TACTTCTCCC GTGACCCCGA CGGCGCGCTG 
CGCCTGTCGC CCAAGGCGAT CCGGCAACTC GGCCAGTCCA TCCTGCGGGA CGTCGCGCAC 
CGGCTGACCT CGCGCGGCGG CGAGCGCAAC ACCGCCCGCA GCGGCGCCAC CGGCGAGGCC 
ACCGGCGCCA GCCGGGAGTG GCGCTTCGGC GATACCGAAC CCTGGGACGC CACCCGTACC 
GTGCTCAACG GCGTACTGCG CCAGGCGGGA GAAGGGGTCT CCGGCCCGGT GGCACTGGAC 
GCCCGGGACA TCGAGGTCAC CGAGACCGAG GCGCGCACAC ACGCCGCCGT CGCACTACTG 
GTGGACACCA GCTTCTCCAT GGTGATGGAG GGCCGGTGGC TGCCGATGAA GCGCACCGCG 
CTCGCCCTGC ACCAGCTCAT CTCCACCCGC TTCCGCGGCG ACAAGCTGGC CCTGATCAGC 
TTCGGGCGGC ATGCCCGCAC GCTCACCGTC GATGAGCTCA CCGGCCTCGA CGGCGTGTAC 
GAACAGGGCA CCAACCTGCA CCACGCACTC ATGCTGGCGC AGCAGCACTT CCGGGCGAAC 
CCGAACGCCC AGCCGGTGTT GCTGGTGGTG ACCGATGGTG AGCCCACGGC GCACCTGGAG 
CGGGACGGCG AGGCCTACTT CGACTACCCG CCGCACCCGC GGACTCTGGC GATGACGGTG 
CGCGGTCTCG ATGCCGCCGC GGCGGCGGGA GCGCAGATCA CCGTCTTCCA GCTGGGCGAT 
GATCCGGGCC TGACCCGGTT CCTCGACGCC GTGGTGCGGC GCGTGGGCGG ACGGCTCGTC 
TCCCCCGATC TGGACGGGCT CGGTGCGGCC GTGGTCAGCG ACTACCTGGG TAGCCGCCGC 
AAGCGCGGCT GA 

 

Protein sequence

MTDRPSMARG SRRRHLAQYR RYTGGPDPLA PPVDVRDALD EIGRDVMNGV SPRRALQEYL 
RRGSANRRGL DKLAEAANRR RQELLHRNNL GKTFEDIRAL LDEAVLAERK ELARALDDDA 
RFQEMQINDL PPSAAQAVRE LADYPWRSPE AAQKYEQIRD LLGRELLDQQ FAGIKQALEG 
ATDEDRAAIQ KMLDDLNTLL DKHNAGTATQ NDFEELMAEH GQYFPENPRN IDELIDALAR 
RSAAAQRLYN SLSPEQRAEL EELSQAAFGS PQLSQALGDL TSKLQQARPG EDWNGSQEFD 
GEQGMGLGDA TQAMQDIADL ESLAEQLSQQ HNGAALDDID LDALQRQLGD EAVADARTLA 
ELEKALKDQG YFSRDPDGAL RLSPKAIRQL GQSILRDVAH RLTSRGGERN TARSGATGEA 
TGASREWRFG DTEPWDATRT VLNGVLRQAG EGVSGPVALD ARDIEVTETE ARTHAAVALL 
VDTSFSMVME GRWLPMKRTA LALHQLISTR FRGDKLALIS FGRHARTLTV DELTGLDGVY 
EQGTNLHHAL MLAQQHFRAN PNAQPVLLVV TDGEPTAHLE RDGEAYFDYP PHPRTLAMTV 
RGLDAAAAAG AQITVFQLGD DPGLTRFLDA VVRRVGGRLV SPDLDGLGAA VVSDYLGSRR 
KRG