Gene Tpau_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3280 
Symbol 
ID9157454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3377233 
End bp3377940 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID 
ProductMspA family protein 
Protein accessionYP_003648204 
Protein GI296140961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.337748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC TTGCGATGCG CGGCGCGGCC GTCGCCGCAG CTGGCGCTGT GCTCGGCGCC 
GCAGCGGTCG GCCCGGCCGT CGCGGATACG GTGATCCCGC TGGGTGTTTC GACCACGACG 
CAGAAGGTGG GCGATGCCAA CATCACGGTG ACCGTGAAGG ATCATTCGGC GCGTCTGTCG 
CCGGGGATGG TGTCTCTTCC CACCACTCGC AACGCGTGGG TGTCGGGTCT GGTGTCCGCG 
AAGATCAATG GCGGTAAGGC CGACGGTGGT TCGATTTCCG CCGGGTATGC GGTCGGTTGC 
CAGGTGGATG TGGGCGCTGC GCAGGTCAAC CTCGGCGCTA GGGCGGGGGT CAACAACAAG 
GACGGCAACA TCGTCGATAA CACCGGTTAC GTGGGTGCTC CTTCGGTGTC CGGGTCGACC 
GGTGGCAGCT TGAAGCTGGC CGCGGGCAGC ATCGGTACCC AGATGCTGAC CTACGACCGC 
TCTACCTGGC CCTCTCCGGG GGACGAGGTC TCGTCGGACT GGGCTGACCC GAGCACCAGT 
TTCAAGTTCT CCGGTGCGAA TGGTTCGCTG AGCTTCCAGG ATCAGACGAT CGGTGTGGAT 
GGCTGTGCGG GCTACGCGCA GGCCAAGTTC TTCGCCAAGG TTAAGGCTAA GGTCGGCAAC 
ACCGAGGGGT ATGTGATTCT CTGGGGCAAG CCCTTCACGC TGGGCTGA
 
Protein sequence
MNKLAMRGAA VAAAGAVLGA AAVGPAVADT VIPLGVSTTT QKVGDANITV TVKDHSARLS 
PGMVSLPTTR NAWVSGLVSA KINGGKADGG SISAGYAVGC QVDVGAAQVN LGARAGVNNK 
DGNIVDNTGY VGAPSVSGST GGSLKLAAGS IGTQMLTYDR STWPSPGDEV SSDWADPSTS 
FKFSGANGSL SFQDQTIGVD GCAGYAQAKF FAKVKAKVGN TEGYVILWGK PFTLG