| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3225 |
|---|
| Symbol | |
|---|
| ID | 9157398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3325203 |
|---|
| End bp | 3326336 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003648149 |
|---|
| Protein GI | 296140906 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.704476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATC TTCTGGGCGC GGATGCGCTC CACCTCGAGT ACCCGACCAA AGTGGTCTTC
GATTCCGTCT CCCTCGGCGT GAACGAGGGC GACCGGATCG GCATCGTCGG CCGCAACGGC
GACGGCAAGT CCAGCCTGCT CGGCATGCTG GCCGGCACCC GCGAACCCGA CTCCGGCCGC
GTCACCCGGC GTGGCGGCGT CCGCGTCGGC GTGCTCACGC AGACCGACCT GTTCGACGAC
GAGGACACCG TCGGACATGC GGTCGTGGGC GATACGCCCG AACACGTGTG GGCGGGCGAC
CCCACGGTCC GCGACATCCT CGCGGGCTTG CTGGCCGACC TGCCCTGGGA CGCCCGCCTC
GGCGAACTGT CCGGTGGGCA GCGGCGGCGC GTCCAGCTCG CGCAGCTGCT CGCGGGCGAG
CACGACGTGC TGGCGCTCGA CGAGCCCACC AACCACCTCG ACGTCGAAGC GATCGAGTGG
CTCGCCGGAC ACCTCAAGAC CCGCTGGCCC GCGAACCAGG GCGGCCTGCT GATGGTGACC
CACGACCGGT GGATCCTCGA TGAGGTGTGC ACCGCGACCT GGGAGGTGCA CGACCGCATC
GTCGAGCCCT TCGAGGGCGG CTACGCCGCG TACATCCTGC AGCGAGTCGA GCGCGACCGG
CAGGCCGCCT CGATCGAGCA GAAGCGGCAG AACCTGGCGC GCAAGGAGCT CGCCTGGCTG
CGCCGCGGCG CCCCGGCCCG CACCAGCAAG CCGAAATTCC GGATCGACGC CGCCAACGCG
CTGATCGCCG ATGTGCCCGA GATCCGCAAC AAGACCGAGC TGGCCTCGCT CGCGGTCTCG
CGCCTCGGCA AGGACGTGGT CGACATCCTG GACGTCTCCG TGAGCTACGG CGATAAGCAG
GTGCTCTCCG ATATCGAGTG GCGCATCGCG CCGGGCGAGC GCACCGGCAT CCTCGGCGTG
AACGGCGCCG GCAAGTCCAC CCTGCTCGGG CTGGTCGACG GCGGCACCGA GCCCACCTCC
GGCACCGTCA AGCGCGGGAA GACCGTCAAG GTGCAGACAC TCACGCAGCG ACTCGATGAG
TTGGAAGATC ACTTGGTTGT GACAGCTTGG GTAGGCCCCG GTTCGACGGC TTGA
|
|---|
| Protein sequence | MANLLGADAL HLEYPTKVVF DSVSLGVNEG DRIGIVGRNG DGKSSLLGML AGTREPDSGR
VTRRGGVRVG VLTQTDLFDD EDTVGHAVVG DTPEHVWAGD PTVRDILAGL LADLPWDARL
GELSGGQRRR VQLAQLLAGE HDVLALDEPT NHLDVEAIEW LAGHLKTRWP ANQGGLLMVT
HDRWILDEVC TATWEVHDRI VEPFEGGYAA YILQRVERDR QAASIEQKRQ NLARKELAWL
RRGAPARTSK PKFRIDAANA LIADVPEIRN KTELASLAVS RLGKDVVDIL DVSVSYGDKQ
VLSDIEWRIA PGERTGILGV NGAGKSTLLG LVDGGTEPTS GTVKRGKTVK VQTLTQRLDE
LEDHLVVTAW VGPGSTA
|
|---|
| |