Gene Tpau_3177 details

Gene Information

• Locus tag: Tpau_3177
• ID: 9157349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3282164
• End bp: 3282934
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 70%
• Product: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
• Protein accession: YP_003648103
• Protein GI: 296140860

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGTG AGGAGGTCGC GTTCTGGGTC GTCGCCGTGC CCGCGGTGCT GTTCGCGCTG 
GGCGTGGTGG TGGCGTCGAA GGCCGTGTAC TCCGCACTGT GCCTGGCGGC CACCATGATC 
CTGCTCGCCG TCGCCTATCT CTCGCAGGGC GCGATGTTCC TCGGCGTGGT CCAGGTCGTG 
GTCTACACCG GCGCCGTCAT GATGTTGTTC CTGTTCGTGG TGATGCTGGT GGGTGTCGAC 
TCGTCGGACT CACTCGTGGA GACCCTGCGC GGACACCGGG TGGCCGCGGC GGTCGCCGGT 
ACCGGATTCG GCCTGCTGCT GGTGACGCTG CTGGCCCGGG CCGTGCTGCC GGTGCCGCGC 
CCCGTCGACG GGGTGGCCCC GCAGTACCCG CCGAACTCGG TGGAGGCCTT GGCCGACACC 
GTCTTCGTGC GCTACGTGTG GGCCTTCGAG CTGACCGCCG CACTGCTCAT CACAGCGACC 
CTCGGAGCGA TGATCCTCGC TCATCGCGAG AAGCTCACGG CGCCCCTCTC GCAGCGCGAG 
CAGTCCATCC TCCGATTCCG GGAGGGGCGT CGCGCTACTC CGCTGCCCAA CCCCGGGGTG 
TACGCGCGGG GCAACGCGGT CGATCTGCCG GCCTTGTTGC CCGACGGTTC GCCTGCACCG 
GATTCGGTGA ATCGCACGCT GACCCCGCGC ACGCCCGGAC AACGCCGTGA GTTGCCCGGC 
CGCGGCCGCA CCCTTGACGA CGATCCGGTC ACGAGCGAGG TGGCACCGTG A 

 

Protein sequence

MTGEEVAFWV VAVPAVLFAL GVVVASKAVY SALCLAATMI LLAVAYLSQG AMFLGVVQVV 
VYTGAVMMLF LFVVMLVGVD SSDSLVETLR GHRVAAAVAG TGFGLLLVTL LARAVLPVPR 
PVDGVAPQYP PNSVEALADT VFVRYVWAFE LTAALLITAT LGAMILAHRE KLTAPLSQRE 
QSILRFREGR RATPLPNPGV YARGNAVDLP ALLPDGSPAP DSVNRTLTPR TPGQRRELPG 
RGRTLDDDPV TSEVAP