| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3129 |
|---|
| Symbol | |
|---|
| ID | 9157300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3238193 |
|---|
| End bp | 3239023 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | putative fatty acid desaturase |
|---|
| Protein accession | YP_003648055 |
|---|
| Protein GI | 296140812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.353382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCCA CCACCACCGA GGACGACCTG AATCTCGCCA TCGACAAGGC GCTGCCGGAC
ATCCGTGCCG CCTACGTCGA GGCAGGTGAT GCGTGGCAGC CGCACGACTA CATCCCGTGG
GACGACGGTC GCAACTACGC CTTCCTCGGC GGCGAGGACT TCGATCCGGC CGATGTGAAG
GTGCACCCCG TCGTGGCGCA CGGGCTCGTG CTCGGCCTGC TGACGAAGGA TCACCTGCCG
TCGTTCCACC GCCTGCTCGC CCAGCACCAC CTGATCGATT CGGACTGGGG CAAGTTCGTC
GGCCACTGGA CCGCCGAGGA GAACCGACAC GCGATCTCAC TGCGCGATCA TGTCGTCGTC
AGCCGCACGT TCGATGTCGA GCAGCTGGAG GCCTGGCGCC TGGAAGCCGT CACCCGGGGT
TACCGCCAGT ACGAGGGCAC CCGCGATGAG CTGCACGTGG CTGAGCAGAT AGCCATGGTG
ATGACGCACG AGGTGCTCTC CGCCGACTAC TTCGACCGGC TCGCCGACTT CGCCGAGAAG
ACCGACGGCA CCCCGGCCGG CCTGGTGACC ACCCTGCGCA AGATCGCCCA CGATGATCGT
GTGCAGCTGC AGTACTGGAC CGAGCTGTTC GCCGTGGCGC TCGACGTCAA CGAGGGCCAT
GCCAAGGACG CCCTGCTGGG CCAGGCACGG GCGGTGTCGG CGATCGGTGC CGAGACCGCC
GAGGGACTCG ACGAGTCGCG CCGGATCGTG GTCGAGGCCG AGATCGGCAC TCCCGAGCGT
GACCGCGAGT TGATCTCCGG GCTGCTCGAG CGGTGGGCTC TGGCCCTGTA G
|
|---|
| Protein sequence | MTSTTTEDDL NLAIDKALPD IRAAYVEAGD AWQPHDYIPW DDGRNYAFLG GEDFDPADVK
VHPVVAHGLV LGLLTKDHLP SFHRLLAQHH LIDSDWGKFV GHWTAEENRH AISLRDHVVV
SRTFDVEQLE AWRLEAVTRG YRQYEGTRDE LHVAEQIAMV MTHEVLSADY FDRLADFAEK
TDGTPAGLVT TLRKIAHDDR VQLQYWTELF AVALDVNEGH AKDALLGQAR AVSAIGAETA
EGLDESRRIV VEAEIGTPER DRELISGLLE RWALAL
|
|---|
| |