| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3126 |
|---|
| Symbol | |
|---|
| ID | 9157297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3234868 |
|---|
| End bp | 3236196 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003648052 |
|---|
| Protein GI | 296140809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.219932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA CCGTCGACGC GCAGATAGTG CAGTGGCGCG GCTATCTGGA GGGCCGGCGC
CGGATGCGGG CCGACGAGGT GGACGAGCTC GAATCCCACC TGCGCGATCA GATCTCGGAT
CTCGAAGCGC GCGGCCTCGA CGGCGAGGAG TCGTTCCTGG TGGCGGTCAA ACGGATGGGT
GCCGCCGACG CCGTGGCACA CGAGTTCGCC CGGGAACACT CCGACCGGCT GTGGAAGCAA
CTGGTGCTCG GCAGCGCCGA CGAGAGCTCC GGGCGCCGCG GCGAACTCCC GGTGGTGCTC
GCCCTCGGTG CCGGTGCCGG GCTCGCGTTG CTGGTGCTCC TGCACCTGCT CGGTGACGCC
GCCCCGCGCT TCGTGGGTTT CGCGGTCGCG CCCTTCCTCA TGGGGTACTT CGCGTGGAAG
CGAGCGATGC CGGTACGCCT CGCTGCCGCG GTGCTCGCCG GCTTCGCCGT GCTGGCGGCA
TTGCTCGCCG CGTACCCGTT CGTCGCCGGC GGCTCCACGG AGACCCTGTC CGTGATGGCC
GCGCCGGTGG TGCTGTGGTT CGGCGTGGGC GTCGCCTACA CCGGTGGGGC CTGGCGATCG
GCGCCGCGGC GGATGGATTT CGTACGGTTC ACCGGCGAGT TCCTCATCTA CTTTCTGCTC
ATCGCGCTCG GCGGCGGTGC CATCACCGCT CTGACGATCG GCGCGCTCGC CACCGTCGGG
CTCGACGCGG AGGTGCCGGT CACCGAATGG GCGCTCCCGG TCTGCATCGG CGGCGCGGTT
CTGGTGGCGG CATGGTTGGT GGAGGCGAAA CAGGAGGTGA TCGAGAACAT CGCGCCCGTG
CTGACCCGGA TCTTCACTCC GATCACGGTG CTGATGCTGC TCGTGGTGCT CGGTGCCTTC
GCCTCGAGGC CGGGTCTGAT CGGTGCCGAC CGCGATCTGC TGGTGCTGAT GACTGTGGTG
CTGGTGCTGG TGGTGGGGCT GCTGTTGTAC GCGGTCTCGG CGCGCGATCC CCGGCGCCGC
CCTGACGTCT TCGACCGGTT GCAGGTGGCG CTGGTGGTCG CGGCGGTCGC CGTGGACCTG
ATAGTGCTGG TCGCGATGGT CACCCGGACC GCGGAGTTCG GCACCTCACC CAACAAGGCC
GCGGCATTGG GGCTGAACCT GATCCTGCTG GTGATCCTCG TGCGGGCGGC GGTACTGGGC
TTCGGATTCG TACGGGGGAG CAGGGACTTC GCCGCGATCG AGCGGTGGCA GACGACCACG
CTGCCCGCCT ACGCGGCGTG GGCGGCGATC GTCACGCTCG CCTTCGGCCC GCTCTTCGGG
TTCGTCTAG
|
|---|
| Protein sequence | MSGTVDAQIV QWRGYLEGRR RMRADEVDEL ESHLRDQISD LEARGLDGEE SFLVAVKRMG
AADAVAHEFA REHSDRLWKQ LVLGSADESS GRRGELPVVL ALGAGAGLAL LVLLHLLGDA
APRFVGFAVA PFLMGYFAWK RAMPVRLAAA VLAGFAVLAA LLAAYPFVAG GSTETLSVMA
APVVLWFGVG VAYTGGAWRS APRRMDFVRF TGEFLIYFLL IALGGGAITA LTIGALATVG
LDAEVPVTEW ALPVCIGGAV LVAAWLVEAK QEVIENIAPV LTRIFTPITV LMLLVVLGAF
ASRPGLIGAD RDLLVLMTVV LVLVVGLLLY AVSARDPRRR PDVFDRLQVA LVVAAVAVDL
IVLVAMVTRT AEFGTSPNKA AALGLNLILL VILVRAAVLG FGFVRGSRDF AAIERWQTTT
LPAYAAWAAI VTLAFGPLFG FV
|
|---|
| |