Gene Tpau_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3115 
Symbol 
ID9157286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3225219 
End bp3225836 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648041 
Protein GI296140798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0571387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTT TACCGTTCGT GCTCCGCGTC GCGGTCGGCG CCGTGGCGCT CGCCGCCGAG 
AAGGGCCAGG AGATCGCCAC GGGCGCGGCG AGCGCACCGA TCACGCTGGG CAGCAAGTCG
GCGCAGGCGT TCATCCGGGT GCAGCAGGAT CTGGCCGAAC TCGCCGTACG CGGCGATGCG
ACCCTCGAAA CCCTCTTCCC GCCGAAGGCG GAGGAACAGC CCGCATGGGC CACCTTCGAC
GACGACGAGG ATCTCGACGT CGATCTCCCG GCCCCGCCCA CCGCACCGTT CGGCACCGTC
CGGCCCGCTA CCGAGAAGGC CGCGGACACG GCGCAGTCGC CCGAGCAGCC GGAGGAGACC
GCACCGTCGG GCACCGGCCG GTACGCCCTC TACAGCTCCC CCGCGCCGAC GCCCGGCGAT
TCCGGGCCGG ACACCGCAGA CCTGGACCTG CCCGACGCCG TGCGCCGGAT CGACTACCCC
GAGCTGACCC TCGCGCAGCT CCGCGGCCGG CTCACGAGCC TGTCGCACGA CGATCTCGCG
GCACTGCTCG CGTTCGAACG CGAGCACAAG GCGCGGGCAC CGTTCCTCAC GATGCTCGAG
AACCGCCTGA ATCGGTGA
 
Protein sequence
MSRLPFVLRV AVGAVALAAE KGQEIATGAA SAPITLGSKS AQAFIRVQQD LAELAVRGDA 
TLETLFPPKA EEQPAWATFD DDEDLDVDLP APPTAPFGTV RPATEKAADT AQSPEQPEET
APSGTGRYAL YSSPAPTPGD SGPDTADLDL PDAVRRIDYP ELTLAQLRGR LTSLSHDDLA
ALLAFEREHK ARAPFLTMLE NRLNR