Gene Tpau_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3090 
Symbol 
ID9157261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3202348 
End bp3202980 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648021 
Protein GI296140778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.455741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCA CCGGATTCCC CGAGGCGGCG CTGGACTTCT ACGACGACCT CGAGGCGGAC 
AATTCGAAGG TGTTCTGGGA GGCGCACAAG GACACCTACC GGTCGGCCGT CGCCGAGCCG 
ATGACCGCGT TGACCGAGGA GCTGGCAGAC GAGTTCGGGA CCGCCAAGAT CTTCCGGCCG 
TATCGTGACG TGCGCTTCTC CAAGGATAAG ACGCCCTACA AGACACATCA GGGTGCGTTC 
ATCGCGGTGG GCCCGGCAAC CGGTTACTAC GTGCAGATTG GAGCGCCGGG CGTGCGGGTG 
GGCGCCGGAT TCTACGACGC CAGTCCCACC CGCCTCGCCG CCTTCCGCAA GGCCATCGAC 
CACGAGCGGT ACGGGCCCGA ACTGGAGCAG ATCGTCGCGA AGCTGGGCCG CAAGGGCTGG 
GAGATCGGCG GCGACACGCT CAAGACGGCA CCGCGCGGGT GGGACGCCGA TCATCCCCGG 
ATCGAACTGC TCCGCCACAA ATCGCTGACC GCCATGCGCG ACTACGGATT CGGCGAGATC 
ATCCATTCAC ACAAGCTGGT CGCGCAGATC CGCAAGCACT GGCGCGAGAG CGCACCTCTC 
CTCGACTGGC TCGTCGAGCA CGGGGACCGC TGA
 
Protein sequence
MSFTGFPEAA LDFYDDLEAD NSKVFWEAHK DTYRSAVAEP MTALTEELAD EFGTAKIFRP 
YRDVRFSKDK TPYKTHQGAF IAVGPATGYY VQIGAPGVRV GAGFYDASPT RLAAFRKAID 
HERYGPELEQ IVAKLGRKGW EIGGDTLKTA PRGWDADHPR IELLRHKSLT AMRDYGFGEI 
IHSHKLVAQI RKHWRESAPL LDWLVEHGDR