| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3085 |
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| Symbol | |
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| ID | 9157256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3198985 |
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| End bp | 3200184 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003648016 |
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| Protein GI | 296140773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.13548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACGCC GCGGCCTGCA CGGACTGATG GATGCCGGCG CGACGGTGCG GGCGGAGAAC
GCCGCCCGCA CCTCGTACGG TCGACTGCTG GCCCTGCTCG CGGCCCGCAC CCACGACCTC
GCCGCCGCGG AGGATGCGCT CGCCGACGCC TTCGAGCGCG CCCTCACGCG GTGGCCGGTC
GACGGGGTGC CCGACGATCC CGACGCCTGG CTGCTCACCG TCGCACGCAA CCGCCAGCGC
GACCACTGGA AGTCGGCGGC GCAGCGCAGC ACCGTCCCGC TCGATGACGT GCACGACGGC
CCCGCTCTGC CGGACCAGCC CGACCAGCGC TTCGAGCTAC TCCTCGTGTG CGCCCACCCC
GACGTCGCCG ACGCCGCCGT GCCGCTCATG CTCAACACCG TGCTCGGCTT CACCGCTGAA
CAGATCGGCC GCGCATTCCT CATCCCCACC GCCACCATGG CTGCGCGACT GACCCGCGCC
AAGAAGCGGA TCCAGCGCGA CCAGGTGCCC TTCACGATCC CCGAGGGCGC GGAGGTCGGC
GCCAGGATCG ACGCGGTCCT CGAGGCCGTG TACGGCGCGT ACAGCCTTCA GTGGCCCACG
CCGCCGCGCG AGAGACACGC TCTTCTGCTC GGCCTCGTCG AGACGATCAC CGATACCGCA
CCCACCGTCG CCGAAGCCCA CGGTCTCGCG GCGACGCTGT ACCTGAGCAG CGCCCGGCTC
CCCGCACGGC TCGCGGGCGA CGGTGGTTTC GTTCCACTGC CGCAACAGGA TCCGCGTCGT
TGGGACCGAG ATCTCATCGC CCTCGGACAC CGTCACCTGC GCGCGGCGCA CGCACTGGGC
ACCGTTGGAC GATTCCAGCT CGAGGCTGCT ATCGGCGCCG TGCACTGTGC CCGGGCACCC
GGCGCGGCAC CGGATTGGCG CACGCTGCAC GGGCTGTACG GCTCGCTGCA GGCGATCGCA
CCGACCCGCG GTGGGGCCGT CGCGCTCGCC GCGGTCACCG GTGAGCTCGA CGGTGCCGAG
GCCGGCTTGG CCGCGCTCGA CGCGATACCG GATACCGAAC GGCTGCAATC GGCCTGGGCG
TTGCGGGCCC ACCTCTTACG CCGCCTCGGT GACCCGCGCG CGGAATCCGC GTACGACAAG
GCGATCTCAC TGACCACAGA TCCCGGCGAG CGGGCGTACC TCGCCGCGCG GCGCGGGTAG
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| Protein sequence | MERRGLHGLM DAGATVRAEN AARTSYGRLL ALLAARTHDL AAAEDALADA FERALTRWPV
DGVPDDPDAW LLTVARNRQR DHWKSAAQRS TVPLDDVHDG PALPDQPDQR FELLLVCAHP
DVADAAVPLM LNTVLGFTAE QIGRAFLIPT ATMAARLTRA KKRIQRDQVP FTIPEGAEVG
ARIDAVLEAV YGAYSLQWPT PPRERHALLL GLVETITDTA PTVAEAHGLA ATLYLSSARL
PARLAGDGGF VPLPQQDPRR WDRDLIALGH RHLRAAHALG TVGRFQLEAA IGAVHCARAP
GAAPDWRTLH GLYGSLQAIA PTRGGAVALA AVTGELDGAE AGLAALDAIP DTERLQSAWA
LRAHLLRRLG DPRAESAYDK AISLTTDPGE RAYLAARRG
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