| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3028 |
|---|
| Symbol | |
|---|
| ID | 9157198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3136747 |
|---|
| End bp | 3138123 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003647961 |
|---|
| Protein GI | 296140718 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.62208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGAGA TGAGCACGTC AACCGAACCC CGGGACACCA GCGCCATCGG GAAGAACCCG
ATCCGACGGA ACCCGACAGG CCAGCTGATC CGCGCCCTGA TGGCCGTGGT CCAGACCCCG
TTCGTACAGA ACCGTGGCCT GCACGATCTC GTGAACCGCT TCGCCTATGA GGGCACCAAG
ACCGGTTTCA AGGCACTCGG CGCCGCCAAT CGCACCTTCC AGGCGGTCAC CAGCACGGGC
AAGCCCAAGC GCCTGAATTC GACGTCGAAG TCCAACTACG ACCTGACCCC GGACGACGAG
CAGAAGATGA TCGTGGACAC GGTCAAGGAC TTCGCCGCCG AGATCGTCCG GCCCGCGGCC
TTCGACGCGG ACGCCGCGAC CGCCGCACCG GACTCGCTCC TCGAGCGGGC CACCGAGCTG
GGCATCACGC TGATCAACGT GCCGGAGGAG CTCGACGGTG CCGGTTCCGA CCGCGGCGCC
GTGACCAACG CACTCGTCGC ATCGGCGCTG TCGTACGGCG ACATGGGCCT CGCGCTACCG
ATCCTCGCAC CCAGTGGTGT GGCGGTCACG CTGGCGCAGT TCGGCTCCGA CGGCCAGCAG
CAGACCTACC TCAAGGAGTA CGCGGGCGAG AAGGTGCCCC AGTCCTCCGT GGTGATCGCC
GAGCCCGGCG CACTGTTCGA TCCGTTCGCG CTGTCCACCA AGGCCACCCG CACCGCGGGC
GGGTACGTGC TGACCGGCGT CAAGTCCATG GTCCCCCAGG CTGCGAGCGC CGAGTTGTTC
GTCGTCGGCG CCGAGCTGGA CGGTAAGCCC GCGCTGTTCA TCGTGGAGTC GGGCACGAAC
GGCGTCATCA TCGAGGGCGA TCCGAGCATG GGCCTGCGCG CCGCGTCGCT CGGCCGCCTG
AACCTCAACA ACGTCAAGGT CCCGTCGAGC GCTCTGTTGG GCGAGGTCGA CCTCGACACC
GCCACCCAGA ACTACACCGA CGTGGTGCGC CTGGCCCGCC TCGGCTGGTC GGCGCTGGCG
CTCGGCACCT CGCGTGCGGT GCTCGACTAC GTGACCCCGT ACGTCAAGGA GCGCGAGGCC
TTCGGTGAGC CGATCGCGCA CCGTCAGGCC GTCGCCTTCG CGGTAGCCGA TATGGCGACC
GAGATCGACG GGCTGGAGCT GTTGGTGTGG CGCGGCGCCT CGCGCGCCGA GCAGGGCCTG
TCCTTCGGCC GCGAGGCCGC GCTGGCGCGG AAGTTCGCGA CGGACAAGGG CATGCGCATC
GGCCTCGACG GCGTGCAGCT GCTCGGCGGC CACGGCTTCA CCAAGGAGCA TCCGGTGGAG
CGCTGGTACC GCGACCTGCG CGGCGTGGGC ATCGCCGAGG GCGTCGTCGT CCTCTAG
|
|---|
| Protein sequence | MVEMSTSTEP RDTSAIGKNP IRRNPTGQLI RALMAVVQTP FVQNRGLHDL VNRFAYEGTK
TGFKALGAAN RTFQAVTSTG KPKRLNSTSK SNYDLTPDDE QKMIVDTVKD FAAEIVRPAA
FDADAATAAP DSLLERATEL GITLINVPEE LDGAGSDRGA VTNALVASAL SYGDMGLALP
ILAPSGVAVT LAQFGSDGQQ QTYLKEYAGE KVPQSSVVIA EPGALFDPFA LSTKATRTAG
GYVLTGVKSM VPQAASAELF VVGAELDGKP ALFIVESGTN GVIIEGDPSM GLRAASLGRL
NLNNVKVPSS ALLGEVDLDT ATQNYTDVVR LARLGWSALA LGTSRAVLDY VTPYVKEREA
FGEPIAHRQA VAFAVADMAT EIDGLELLVW RGASRAEQGL SFGREAALAR KFATDKGMRI
GLDGVQLLGG HGFTKEHPVE RWYRDLRGVG IAEGVVVL
|
|---|
| |