Gene Tpau_2939 details

Gene Information

• Locus tag: Tpau_2939
• ID: 9157107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3045539
• End bp: 3047662
• Gene Length: 2124 bp
• Protein Length: 707 aa
• Translation table: 11
• GC content: 71%
• Product: glycogen debranching enzyme GlgX
• Protein accession: YP_003647876
• Protein GI: 296140633

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCACCG ACCAACACCT GTCCCCCGGC GCACACACCC CACTGGGCGC CACTCCGCAG 
CCCGGCGGCG TGAACTTCGC CGTCCACGCG CCCGACGCCA CCGACGTGTG GGTGGGGCTG 
ATCGACGACG ACGGTGCCGA ACGCCGGCTA CGGCTGCCCG CGCAGACTGC GGGCGTCCAC 
CATGGCTTCG TCGCCGGAAT CGGTGAGGGC GCGCGCTACT GCCTGCGAGC CGCGGGTCCA 
TGGGCACCCG AGCGCGGGAT ACGGTTCAAC CCGAACAAGG CCCTCATCGA TCCGTACGCC 
CGTCGCATCA GCGGCCGGCT CGGCGATGCG ACCGCCCTGC TCCCGCACGA CCAGGACGGC 
GCGCCGTCGG CCATCGACTC GCTCCCGGAC ATCCCCCTGT CCGTGGTCAC CGGTCCTCCC 
GCGCCGCCGG AGGCCGGGCC GCGCGTGCCC TGGGACCGCA CGCTGATCTG CGAGCTGCAC 
GTCGGCTCCT ACACGGCGCG GCATCCCGGC GTCCCCGACG AACTGCGCGG CACCTACCTC 
GGCCTCGCAC AGCCCGCGGT GCTCGACCAC CTACGCCGCA TCGGGGTCAC GGCCGTCGAA 
CTGCTGCCCG TCCAGGCGTG CCTCACCGAA CCCGGCGTGC GGGCCCGCGG CATGCGAAAC 
CACTGGGGCT ATTCGACGGG CGCCTACTTC GCCCCGGATC CGCGGTTCGC CGCCCAGCCC 
GGACGTGAGG TCGAGGAGTT CGCCACCATG GTCTCGGCCC TGCATTCGGC CGGCCTCGAA 
GTGCTCCTCG ACGTGGTCTA CAACCACACC GCCGAATCGG CGGCCGATGG TCCGTCGTTG 
TCCTGGCGCG GTCTCGACGC CCCCGGCTAC TACCTGCTCG ACGGCGGCGA GGACCTCGAT 
TACACCGGAT GCGGCAATAC CGTCGATTGC GCCTCGCCTG CGGCACTGCG GATGGTGCTC 
GACAGCCTCC GGTACTGGTG CCAGAGCTTC GGAGTGGACG GATTCCGGTT CGACCTCGCG 
AGCGTGCTCG GCCGCGGTCG CACGGCGACC GGCCCACAGG GCCCGGCGAT TCCGTTCGAT 
CACCGCGCTC CGCTCCTGTC CGCCATCGCC GCCGATCCGG TGCTCGCCAC CCGCAAGTTG 
ATCGCCGAGC CGTGGGATGC GACCGCCGAA GGCTACCGGG TAGGTGGCTT CCCGCCGGTA 
TGGGCGGAAT GGAACGACCG CTACCGCGAC ACGGTGCGCG CCTTCTTCGC CGGTGGTAGC 
ACCGTGGGCG ACCTCGCCTC CCGGGTGTCC GGCAGTCAGG ACCTGTTCGG GGCGCCGGGA 
CGCACCCCGT TCTCCTCGAT CAACTTCGTC ACCGCCCACG ACGGATTCAC CGCCCGCGAC 
GTGGTCTCGT ACGAGCGCAA GCACAACGAG GCCAATGGCG AGAACGACCG GGACGGCACC 
GACAACAACC ACTCGGTCAA TCACGGATTC GAAGGCGGCA CCACCGATCC CGCGATCCTC 
GCTGCGCGCG CCCGGCATGT GCGTGCGCTG CTGGCCACCT TGCTGCTGTC CACCGGCACC 
CCGATGCTGC TCGGCGGCGA CGAGATGGGG CACACCCAGT ACGGCAACAA CAACGCCTAC 
TGCGTGCCCG AGGATGCCGC GGCGGCCGAC GCCTACGCCA TCGATTGGGA CGCCGCCGAC 
TCCGACCTCA CCGCGTTCGT CGCCCGGGTC ACAGCGGTCC GCCGCGCGAC GCCGGTGCTG 
CGGCAACACG AGTTCTTCGG CGGCCGGCTC ACCCGGAGCG GGGAGCCCGA CCTCGCGTGG 
TTCGGTGCCG ACGGCGCGCA GATGCCCGGC GACGCCTGGC AATCACCGGA TGAGCGCACC 
CTGCAGGCCT GGGTCGACGG TTCCGATGTC CGCTCCCCCA GCCACGACCG GTCGGTGCCC 
GACAAGGACG CGCTCATCGT GTGGCATTCG GGCGACGAGG CGACCACGGT GACGCTCGGC 
GCACCGCAAT CGTGTTCGCA CGGATGGGAA CTCATCGTCG ACACGGCGCA GCCCACCGGT 
GAACCCGCGG GCGACCCGCG GTTCGCCGCG CGCGCCGAGG TCACCCTCAC CGGCCCCACC 
GTGCTGGTCT TCCAGGAGGC GTGA 

 

Protein sequence

MSTDQHLSPG AHTPLGATPQ PGGVNFAVHA PDATDVWVGL IDDDGAERRL RLPAQTAGVH 
HGFVAGIGEG ARYCLRAAGP WAPERGIRFN PNKALIDPYA RRISGRLGDA TALLPHDQDG 
APSAIDSLPD IPLSVVTGPP APPEAGPRVP WDRTLICELH VGSYTARHPG VPDELRGTYL 
GLAQPAVLDH LRRIGVTAVE LLPVQACLTE PGVRARGMRN HWGYSTGAYF APDPRFAAQP 
GREVEEFATM VSALHSAGLE VLLDVVYNHT AESAADGPSL SWRGLDAPGY YLLDGGEDLD 
YTGCGNTVDC ASPAALRMVL DSLRYWCQSF GVDGFRFDLA SVLGRGRTAT GPQGPAIPFD 
HRAPLLSAIA ADPVLATRKL IAEPWDATAE GYRVGGFPPV WAEWNDRYRD TVRAFFAGGS 
TVGDLASRVS GSQDLFGAPG RTPFSSINFV TAHDGFTARD VVSYERKHNE ANGENDRDGT 
DNNHSVNHGF EGGTTDPAIL AARARHVRAL LATLLLSTGT PMLLGGDEMG HTQYGNNNAY 
CVPEDAAAAD AYAIDWDAAD SDLTAFVARV TAVRRATPVL RQHEFFGGRL TRSGEPDLAW 
FGADGAQMPG DAWQSPDERT LQAWVDGSDV RSPSHDRSVP DKDALIVWHS GDEATTVTLG 
APQSCSHGWE LIVDTAQPTG EPAGDPRFAA RAEVTLTGPT VLVFQEA