11 homologs were found in PanDaTox collection
for query gene Tpau_2896 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_2896  hypothetical protein  100 
 
 
229 aa  466  9.999999999999999e-131  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2740  hypothetical protein  43.88 
 
 
220 aa  145  5e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.286647  normal 
 
 
-
 
NC_012857  Rpic12D_4454  hypothetical protein  37.74 
 
 
229 aa  123  2e-27  Ralstonia pickettii 12D  Bacteria  normal  0.327935  normal  0.0437667 
 
 
-
 
NC_002947  PP_2809  hypothetical protein  35.45 
 
 
241 aa  122  7e-27  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6792  hypothetical protein  32.62 
 
 
229 aa  120  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5046  hypothetical protein  36.94 
 
 
224 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.776863  n/a   
 
 
-
 
NC_008543  Bcen2424_5814  hypothetical protein  36.94 
 
 
224 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4365  hypothetical protein  40.2 
 
 
224 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6835  hypothetical protein  35.45 
 
 
229 aa  118  9.999999999999999e-26  Burkholderia sp. 383  Bacteria  normal  0.0446166  normal  0.124135 
 
 
-
 
NC_007509  Bcep18194_C6827  hypothetical protein  34.87 
 
 
232 aa  95.1  8e-19  Burkholderia sp. 383  Bacteria  normal  0.0370617  normal  0.223579 
 
 
-
 
NC_007336  Reut_C6397  hypothetical protein  32.32 
 
 
220 aa  88.6  8e-17  Ralstonia eutropha JMP134  Bacteria  normal  0.933792  n/a   
 
 
-
 
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