Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2581 |
Symbol | |
ID | 9156742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2677707 |
End bp | 2681036 |
Gene Length | 3330 bp |
Protein Length | 1109 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | carbamoyl-phosphate synthase, large subunit |
Protein accession | YP_003647523 |
Protein GI | 296140280 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.195323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACGGC GCACCGATAT CCAGCACGTC CTGGTGATCG GCTCGGGCCC GATCGTGATC GGCCAGGCCT GCGAGTTCGA CTACTCCGGC ACCCAGGCCT GCCGTGTGCT GCGCGCCGAG GGACTGCGCG TGTCGCTGGT GAACTCGAAC CCGGCAACGA TCATGACCGA TCCGGAGTTC GCCGACTCGA CCTACATCGA GCCGATCAAC CCGGAGTACA TCGAGAAGGT CATCATCGCC GAGCGCGATA AGGGCTTCCC GATCGATGCG GTGCTCGCCA CTCTGGGTGG CCAGACGGCG CTCAACGCGG CCGTCGGCCT GCACGAACAA GGCATCCTGG ACAAGTACGG CATCCGCCTG ATCGGCGCCG ACTTCGACGC CATCCAGCGC GGTGAGGACC GGCAGAAGTT CAAGGACATC GTCGCCAAGA TCGGCGGCGA ATCCGCCCGC TCCAAGGTGT GTTTCACGCT CGACGAGTGC AAGCAGACCG TCGCCGACCT CGGCTACCCG GTGGTCGTGC GGCCGTCGTT CACCATGGGT GGTCTCGGGT CCGGCATGGC CTACGACGAG GCCGACCTGG AGCGCATCGC CGGCGCCGGT CTCGCCGCCT CGCCGACCGC GAACGTACTC ATCGAGGAGT CGATCCTCGG CTGGAAGGAG TACGAGCTCG AGCTCATGCG CGACGGCCGC GACAACGTCG TGGTCGTCTG CTCCATTGAG AACGTCGACC CCGTGGGTGT GCACACCGGC GACTCGGTCA CCGTGGCACC GGCCATGACG CTCACTGACC GCGAGTACCA GATCATGCGC GACCAATCGA TCGCGATCCT CCGCGAGGTG GGCGTCGACA CCGGCGGTTG CAACATCCAG TTCGCGCAGA ACCCGCGCGA CGGCCGCCTC GTCACCATCG AGATGAACCC CCGCGTCTCG CGCTCCTCGG CGCTGGCGTC GAAGGCCACC GGCTTCCCGA TCGCCAAGAT CGCCGCGAAG CTCGCCGTGG GCTACACGCT CGACGAGATC CTCAACGACA TCACCGGCGA GACGCCGGCG TGCTTCGAGC CGACCCTCGA CTACGTGGTG GTCAAGGCCC CGCGCTTCGC CTTCGAGAAG TTCCCCGGCG CCGACGACAC CCTCACCACC ACCATGAAGT CCGTCGGCGA GGCGATGAGC CTGGGCCGCA GCTTCGCTGA GGCGTTCGGC AAGGTGATGC GCTCGCTCGA AACAAAGCGT CACGGCTTCT GGACCGGGGC TCCGGTCGAG GGCTCGCTCG CCGAGCTGCT GGAGGAGATC AAGGTCCCGC GCGACGGCCG GTACTACCTG ATCGGCCGCG CCTTCGAGTT GGGTGCCACG GTCGAGCAGG TCTTCGATTC GACCGCGGTC GACCCGTGGT TCCTGGAGGA GATCAAGGCC ACCGTCGACC TGGGTGCGTA CGTCCGGGAC ACCGACCTGA CCCCGGATCT GGTCCGATTG GCCAAGACTC ACGGGTTCTC CGATCTGCAG ATCGCGAACC TTCGAGGCAT CGGCGAAGAC GAGGTCCGGG CCTTCCGGCA CGAGCACGGC ATCCGCCCGG TCTACAAGAC CGTCGACACC TGCGCCGCCG AGTTCGAAGC CAAGACCCCG TACCACTACA GCAGCTACGA ACTCGATCCG GCGGCCACGA GCGAGGTGGT GCCGCAGACC GAGCGCCCCA AGGTGCTCAT CCTGGGCTCG GGCCCGAACC GGATCGGCCA GGGCATCGAA TTCGACTACT CGTGTGTGCA CGCCGCGCTC ACCCTGAGCC AGGCCGGGTA CGAGACCGTG ATGATCAACT GCAACCCGGA GACGGTGTCC ACCGACTACG ACACCGCCGA CCGGCTCTAC TTCGAGCCGC TGACCTTCGA GGACGTGCTC GAGGTGTATC ACTCGGAGCA GGCCTCCGGA GCGGGTGGTC CCGGCGTCGT CGGCGTGATC GTGCAGCTCG GTGGACAGAC CCCGCTCGGC CTTGCGGCCC GCCTCAAGGC CGCCGGCCTG CCCATCGTCG GTACCTCGCC CGAGGCCATC GACCTCGCCG AGGATCGCGG CGAGTTCGGC CGGGTGCTCA CCGAGGCCGG GCTCCCGGCG CCCAAGTTCG GTACCGCGAC TACTGCCGAG GGCGCCCGCG ATGTCGCCGC CGGGATCGGG TATCCGGTCC TGGTGCGCCC GTCGTATGTG CTCGGCGGCC GCGGTATGGA GATCGTCTAC GACGAGCAGG CGCTGCTGGA CTACATCGGG CGGGCGACCG AACTGACTCC CGACCGCCCG GTGCTGGTGG ACCGTTTCCT GGAGGACGCG GTGGAGATCG ATGTCGACGC GCTGTGCGAC GCCACCGGCG AGGTCTTCAT CGGCGGCATC ATGGAGCACA TCGAGGAGGC CGGAATCCAC TCCGGCGACT CGGCCTGCAC CCTGCCGCCC ACCACTCTGG GCCGCGCCGA CATCGATGCG GTGCGCACCG CCACCGAGGC GCTGGCCCGC GGGATCGGCG TGCACGGCCT GATGAATGTT CAGTACGCGC TCAAGGACGA CGTGCTCTAC GTCCTCGAGG CGAATCCCCG GGCCTCCCGA ACGGTGCCGT TCGTGTCGAA GGCGACTGCT GTGCCGCTGG CCAAGGCGTG TGCCCGCGTG ATGCTGGGCC AGACCATCGC GGAACTGCGG GACCAGGGCA TCCTGCCGCG CGAGGGGGAC GGATCGCAGA TGCCGATCGA GGCGCCGGTC TCGGTCAAGG AGGCGGTGCT GCCGTTCAAC CGGTTCCGTC GCGCGGACGG CAGCGGTGTG GATTCCCTGC TCTCGCCCGA GATGAAGTCC ACCGGCGAGG TGATGGGCGT GGACCGCGAC TTCGGCACGG CGTTCGCGAA GTCGCAGACG GCCGTGAGCG GTTCGCTACC GGCTACCGGC AACGTGTTCG TCTCGGTGGC GAACAAGGAC AAGCGCGCGC TGATCTTCCC GGTCAAGCGA CTCGCGGATC TGGGATTCTC CATCCTGGCT ACAGCGGGTA CTGCAGATGT GCTGCGCCGC AATGGTGTTC ATGTTGAGAC CGTGCTCAAG CATTCGGACG TCATCCCCGA GGGTGAGCAG TCGATCGTCG AGAAGATCAA GGCGGGCGAG GTCGGACTGA TCATCAACAC CCCGTACGGC AATGCCGGTC CGCGAGTGGA CGGGTACGAG ATCCGAACCG CTGCCGTCCA GGCGTCCGTG CCGTGCGTCA CCACCGTCCA GGGTGCCTCG GCGGCGGTCC AGGGCATCGA GGCCGCGCTG CGCGGTGGCA TCGGGGTCAA GAGCCTGCAG GACATGCACG CGGCGCTGGT GAACACGTGA
|
Protein sequence | MPRRTDIQHV LVIGSGPIVI GQACEFDYSG TQACRVLRAE GLRVSLVNSN PATIMTDPEF ADSTYIEPIN PEYIEKVIIA ERDKGFPIDA VLATLGGQTA LNAAVGLHEQ GILDKYGIRL IGADFDAIQR GEDRQKFKDI VAKIGGESAR SKVCFTLDEC KQTVADLGYP VVVRPSFTMG GLGSGMAYDE ADLERIAGAG LAASPTANVL IEESILGWKE YELELMRDGR DNVVVVCSIE NVDPVGVHTG DSVTVAPAMT LTDREYQIMR DQSIAILREV GVDTGGCNIQ FAQNPRDGRL VTIEMNPRVS RSSALASKAT GFPIAKIAAK LAVGYTLDEI LNDITGETPA CFEPTLDYVV VKAPRFAFEK FPGADDTLTT TMKSVGEAMS LGRSFAEAFG KVMRSLETKR HGFWTGAPVE GSLAELLEEI KVPRDGRYYL IGRAFELGAT VEQVFDSTAV DPWFLEEIKA TVDLGAYVRD TDLTPDLVRL AKTHGFSDLQ IANLRGIGED EVRAFRHEHG IRPVYKTVDT CAAEFEAKTP YHYSSYELDP AATSEVVPQT ERPKVLILGS GPNRIGQGIE FDYSCVHAAL TLSQAGYETV MINCNPETVS TDYDTADRLY FEPLTFEDVL EVYHSEQASG AGGPGVVGVI VQLGGQTPLG LAARLKAAGL PIVGTSPEAI DLAEDRGEFG RVLTEAGLPA PKFGTATTAE GARDVAAGIG YPVLVRPSYV LGGRGMEIVY DEQALLDYIG RATELTPDRP VLVDRFLEDA VEIDVDALCD ATGEVFIGGI MEHIEEAGIH SGDSACTLPP TTLGRADIDA VRTATEALAR GIGVHGLMNV QYALKDDVLY VLEANPRASR TVPFVSKATA VPLAKACARV MLGQTIAELR DQGILPREGD GSQMPIEAPV SVKEAVLPFN RFRRADGSGV DSLLSPEMKS TGEVMGVDRD FGTAFAKSQT AVSGSLPATG NVFVSVANKD KRALIFPVKR LADLGFSILA TAGTADVLRR NGVHVETVLK HSDVIPEGEQ SIVEKIKAGE VGLIINTPYG NAGPRVDGYE IRTAAVQASV PCVTTVQGAS AAVQGIEAAL RGGIGVKSLQ DMHAALVNT
|
| |