Gene Tpau_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2513 
Symbol 
ID9156674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2605967 
End bp2606752 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC drug efflux pump, inner membrane subunit, DrrB family 
Protein accessionYP_003647456 
Protein GI296140213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCGA CCGAATCCCG GTTCACCGCC GGCACCTTCG CACCCGCACC ACAGCCGGCC 
GCTCCGGCGG CGATGATCGC CGCGCAGACC CGCATGGAGC TGACACTGCT GCTGCGCAAC
GGCGAACAGC TGCTGCTCAC CATGTTCATC CCGATCGCGC TCCTCATCGG GCTCACCGTG
CTCCCGATCG GCGACGACGT GCTCACGATC GACACACTGG TGCCCGCGAT CATGGCGGTC
GCGGTGATGT CGACGGCATT CACGGGGCAG GCGATCGCCG TGGGCTTCGA CAGGCGGTAC
GGCGCTCTGA AACGCCTCGG CGCGACCCCG CTGCCGAAGT GGGGTGTGAT CGCGGGCAAG
ACCCTCGCCG TGGTGATCGT GGTCGGGCTC CAGGCGCTGA TCCTCGGCGC CATCGGATTC
GCGCTGGGCT GGCGGCCAGA TCCCGTGGGC CTGGTGCTCG GCGCGGGCGT CCTGGCGATC
GGTGTGTTCG CCTTCGCGTC GTTGGGCCTG TTGCTCGGCG GCACCCTGAA AGCCGAAGTG
GTCCTCGCCC TGGCGAATCT GCTGTGGTTC GTGATGTCGG CGATCGGATC GCTCGTGGTC
GTCGATCGAC ACCTCCCCGA TGCCGTCGTA CTCCTGGCCC GACTGTCCCC ATCGGGCGCA
CTGACCGAGG CGCTGATCCG TGCCACCACC GGCGGTGGAC CGGACCTGTT CGGCATCGCC
GTCCTGCTGG TGTGGGGCCT GCTCGGTTCC GCTGCCGCGG TCCGCCTGTT CCGATTCACC
GGCTGA
 
Protein sequence
MTSTESRFTA GTFAPAPQPA APAAMIAAQT RMELTLLLRN GEQLLLTMFI PIALLIGLTV 
LPIGDDVLTI DTLVPAIMAV AVMSTAFTGQ AIAVGFDRRY GALKRLGATP LPKWGVIAGK
TLAVVIVVGL QALILGAIGF ALGWRPDPVG LVLGAGVLAI GVFAFASLGL LLGGTLKAEV
VLALANLLWF VMSAIGSLVV VDRHLPDAVV LLARLSPSGA LTEALIRATT GGGPDLFGIA
VLLVWGLLGS AAAVRLFRFT G