Gene Tpau_2394 details

Gene Information

• Locus tag: Tpau_2394
• ID: 9156554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2490163
• End bp: 2490921
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 69%
• Product: ABC drug efflux pump, inner membrane subunit, DrrB family
• Protein accession: YP_003647339
• Protein GI: 296140096

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.220464
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACCG TCCTGAATCC GAGCATCACC CGCGCGACCA CGCTGCGCGT GCTCCGGCAG 
CTGCGTGCTG ATCCGCGGAC CATCGCCATG ATCGTGGTGG TGCCCACGGC GCTGCTGACG 
CTCATGTACT TCCTCTACCG CGACTCCCCC GGCGGCACAG CGCTGTTCAG CCGCATCGCA 
CTGGTGCTCC TGGGCGTGCT GCCCTTCGCG CTGATGTTCA TCGTCACCTC GATCGCCATG 
CAGCGCGAAC GGGTTTCGGG CACGCTCGAA CGGCTGCTCA CCACACCGCT CGCCAAGGCC 
GACCTGCTGC TCGGCTACGC GGTCGCCTTC TCGGTCGCGG CGACGGCGCA GGCGGTGGTC 
GCGACCACGG TGGCGGCGTA TCTACTCGGC ATGGAGACGG CCGGCAGCGT GTGGCTGGTG 
ATACTCATCG CGGTGGTCGA CGCCTGGCTC GGCGTCGCGC TGGGACTACT GTTCAGCGCT 
TTCGCCCGCA CCGAATTCCA GGCCGTGCAG TTCATGCCGA TCGTCGTGGT GCCGCAGATC 
TTCCTGTGCG GCCTGCTCGT CCCGCACGAC GCCATGCCCG GCTGGCTGCA GGGCATCGCC 
GACGTCCTGC CGATGACGTA CGCGGTGAAG GCGCTGCAGG AGGTGGGTGC CCACGGTTCC 
GCGACCACCA CGATGTGGAC CTCGCTCGCG GTGGTCGCCG GATTCGCCGT CGCCGCGCTG 
GCGCTCGCCG CGGCCACCCT GCCGCGCACA GTCGCGTGA 

 

Protein sequence

MSTVLNPSIT RATTLRVLRQ LRADPRTIAM IVVVPTALLT LMYFLYRDSP GGTALFSRIA 
LVLLGVLPFA LMFIVTSIAM QRERVSGTLE RLLTTPLAKA DLLLGYAVAF SVAATAQAVV 
ATTVAAYLLG METAGSVWLV ILIAVVDAWL GVALGLLFSA FARTEFQAVQ FMPIVVVPQI 
FLCGLLVPHD AMPGWLQGIA DVLPMTYAVK ALQEVGAHGS ATTTMWTSLA VVAGFAVAAL 
ALAAATLPRT VA