Gene Tpau_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2383 
Symbol 
ID9156540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2476308 
End bp2477123 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID 
Producthemolysin A 
Protein accessionYP_003647328 
Protein GI296140085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCA GAGTACGGCT CGACGCCGAG CTGGTCCGCC GCGGTATGGC GCGCTCTCGC 
GAGCAGGCCC GCGAGCTGAT CGAGTCCGGT CGCGTCACCG TCAACAAGCA GGTGGCCCGC
AAGGCCGCCA ATCAGATCGA CCCCGCCGAC CCGGTCCATG TCACCGCTGT CGCCGGTGAG
ATCGACTGGG CCTCCCGCGG TGCCCACAAG CTGATCGGTG CGCTCGATGC GTTCCCCGAC
GTCACCGTCG CCGGACGACG ATGCCTCGAT GCGGGAGCGT CCACGGGCGG GTTCACCGAC
GTCCTGTTGC ACCGCGGGGC CGAACGGGTG TACGCCGTCG ACGTCGGCTA CGGCGAACTG
GTGTGGCGGC TGCGCGACGA CGCCCGGGTC ACCGTCATGG ATCGCACCAA CGTGCGCACA
CTGGAACCGG GAGCGCTGGA CGGACCCGTC GACCTGGTGG TCGGCGATCT GTCCTTCATC
TCGCTGAGCC TGGTGCTGCC CGCGATGGCG GCATGCACCG CCGTCGGGGC GGACCTGCTG
CCGATGATCA AGCCGCAGTT CGAAGTCGGC AAGGGCAACG TCGGCTCCGG CGGTGTGGTC
CGCGACCCGC AGCTGCGGGC GAGTGCCGTT CTCGCCGTCG CTCGAACGGC CGCCGACCAC
GGCCTGCGCA CTCGCGGCGT CACCTACAGC CCGCTCCCGG GACCGTCGGG CAACGTCGAG
TACTTTCTCT GGTTGCGCCG CGAAGACGGG CCGGTGACGC TCCCCGCGGA CGTGGACGAG
ATGATCGCAA CTGCAGTGGC GGAAGGGCCC CAATGA
 
Protein sequence
MARRVRLDAE LVRRGMARSR EQARELIESG RVTVNKQVAR KAANQIDPAD PVHVTAVAGE 
IDWASRGAHK LIGALDAFPD VTVAGRRCLD AGASTGGFTD VLLHRGAERV YAVDVGYGEL
VWRLRDDARV TVMDRTNVRT LEPGALDGPV DLVVGDLSFI SLSLVLPAMA ACTAVGADLL
PMIKPQFEVG KGNVGSGGVV RDPQLRASAV LAVARTAADH GLRTRGVTYS PLPGPSGNVE
YFLWLRREDG PVTLPADVDE MIATAVAEGP Q