Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2213 |
Symbol | |
ID | 9156369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2304115 |
End bp | 2305509 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003647161 |
Protein GI | 296139918 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.040903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCCA GCCACCGTCG TCCCGCCGCC CGTACTCCCG GTGCCTGCAC CTGCGTCGCC GCGGCCGGCG CGGGACTCGT CGGAGCCTTC CTCCTCGCCG GACCCGCCTC AGGCCTCCTG GCCCAGGCGG CCGCGAAGAC CATCGTGGTG GTGGGCGGTG CCAACGACCC CACCGGCAAG GACCAGTGGG CCCGCATCGG TCGCGATCAT TCCGGCACGC CACCGGTGTT CGTGCCCTAC TCGGCTCAAT TCGGTATCGG TTGGCCCGGA CTGGCGCTCA GTCAAGACCG GCGGACGACC TACGCGCAGT CCGTCGACGA GGGTGCGAAC GCCACCGTCA AGGCCGTCGA GGCCGCTGCG GCCCACGACG ACGAGGTCGT CGTGTACACG ATCTCGCAGG GCGCCGACGT GGTCGGGCTC GCCGTGATCC GTTACGGCAA GGACCATCCC GCGCCGTCGG GCGGCGGTGG TCCGAGACTC ACCTTCGTCG AACAGGGCGG TCCCAGCTTC ATTCGCACCG GCATGTGGAA CGTGATCCCG GCAGGGGTCC CGGGGCTGCA CACCGGCCCG ATCCGCAACG ACGGTGCGTC CGGCGCGACT GTCGTTGGAA TCTGCATCAA GGGTGATATC GCCTGTGGTG TAGGAAATCC TGTCTCATCC GTGTTCTACG CATTCCCGGG GTTCATGCTG CACGGTTCCG GGTACACCGC CGAATACATC GGCAGGTACT CCCCCGTCCA TGGCGGCGAG CCCTACACCC CGGGTTCCCA GGGAGAGGTT CCGGTACGGG TCGAGACCGT GCGGCGGGAC GGGCGCACAG TCACCGAATC GATCTACGCC GATGGCTCGT CGAAGCGGAG CTGGACCGAG GACGGCACCA CATGGGTGGT GATCGATACC GGAGAGAACC CCTGGATGCG ATTGCTGCGC TCGACCGGTA CGCCGGTCCC GACGTCACTC GACGCGGTCC TCAACCGTGT GATCCCGGTG CCCGAGCCCG GTGCAGTCAA TCCCTGGCTG CCCCCCGAAG AGCCGGTGCG AGCCGTCCCC GCAGCAGCGC AGCACGTCCC TTCCACCCTG CGCCACGGTA TGGACCGCAG CGACGCCCTC CCTGTTGCCG ATCTCCTTCG CAGGTCGAAC GCAGGCGGGG CGGAACGACC GGCAGCTGAA CCTCCTCGGG CGGACCCGGT GACGGACACC GACAGCGCGG TCGCCGCGCG TGACGTGTCG GAGGAGTACG CACGTGGGGC CGACGGCGCG GATTCCGATG CCTCTTCCGT CGGCGATGGC GGAGGTTCGG ACCAGGTGAC GCCGGACCGC AGCGACGGCA CCGACACCGC CGATTCTCCG GCGCTACAGT CCGATGCGAG CCCGACGACG GCAGTCGCAG CCTGA
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Protein sequence | MSSSHRRPAA RTPGACTCVA AAGAGLVGAF LLAGPASGLL AQAAAKTIVV VGGANDPTGK DQWARIGRDH SGTPPVFVPY SAQFGIGWPG LALSQDRRTT YAQSVDEGAN ATVKAVEAAA AHDDEVVVYT ISQGADVVGL AVIRYGKDHP APSGGGGPRL TFVEQGGPSF IRTGMWNVIP AGVPGLHTGP IRNDGASGAT VVGICIKGDI ACGVGNPVSS VFYAFPGFML HGSGYTAEYI GRYSPVHGGE PYTPGSQGEV PVRVETVRRD GRTVTESIYA DGSSKRSWTE DGTTWVVIDT GENPWMRLLR STGTPVPTSL DAVLNRVIPV PEPGAVNPWL PPEEPVRAVP AAAQHVPSTL RHGMDRSDAL PVADLLRRSN AGGAERPAAE PPRADPVTDT DSAVAARDVS EEYARGADGA DSDASSVGDG GGSDQVTPDR SDGTDTADSP ALQSDASPTT AVAA
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