Gene Tpau_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2213 
Symbol 
ID9156369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2304115 
End bp2305509 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003647161 
Protein GI296139918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.040903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCCA GCCACCGTCG TCCCGCCGCC CGTACTCCCG GTGCCTGCAC CTGCGTCGCC 
GCGGCCGGCG CGGGACTCGT CGGAGCCTTC CTCCTCGCCG GACCCGCCTC AGGCCTCCTG
GCCCAGGCGG CCGCGAAGAC CATCGTGGTG GTGGGCGGTG CCAACGACCC CACCGGCAAG
GACCAGTGGG CCCGCATCGG TCGCGATCAT TCCGGCACGC CACCGGTGTT CGTGCCCTAC
TCGGCTCAAT TCGGTATCGG TTGGCCCGGA CTGGCGCTCA GTCAAGACCG GCGGACGACC
TACGCGCAGT CCGTCGACGA GGGTGCGAAC GCCACCGTCA AGGCCGTCGA GGCCGCTGCG
GCCCACGACG ACGAGGTCGT CGTGTACACG ATCTCGCAGG GCGCCGACGT GGTCGGGCTC
GCCGTGATCC GTTACGGCAA GGACCATCCC GCGCCGTCGG GCGGCGGTGG TCCGAGACTC
ACCTTCGTCG AACAGGGCGG TCCCAGCTTC ATTCGCACCG GCATGTGGAA CGTGATCCCG
GCAGGGGTCC CGGGGCTGCA CACCGGCCCG ATCCGCAACG ACGGTGCGTC CGGCGCGACT
GTCGTTGGAA TCTGCATCAA GGGTGATATC GCCTGTGGTG TAGGAAATCC TGTCTCATCC
GTGTTCTACG CATTCCCGGG GTTCATGCTG CACGGTTCCG GGTACACCGC CGAATACATC
GGCAGGTACT CCCCCGTCCA TGGCGGCGAG CCCTACACCC CGGGTTCCCA GGGAGAGGTT
CCGGTACGGG TCGAGACCGT GCGGCGGGAC GGGCGCACAG TCACCGAATC GATCTACGCC
GATGGCTCGT CGAAGCGGAG CTGGACCGAG GACGGCACCA CATGGGTGGT GATCGATACC
GGAGAGAACC CCTGGATGCG ATTGCTGCGC TCGACCGGTA CGCCGGTCCC GACGTCACTC
GACGCGGTCC TCAACCGTGT GATCCCGGTG CCCGAGCCCG GTGCAGTCAA TCCCTGGCTG
CCCCCCGAAG AGCCGGTGCG AGCCGTCCCC GCAGCAGCGC AGCACGTCCC TTCCACCCTG
CGCCACGGTA TGGACCGCAG CGACGCCCTC CCTGTTGCCG ATCTCCTTCG CAGGTCGAAC
GCAGGCGGGG CGGAACGACC GGCAGCTGAA CCTCCTCGGG CGGACCCGGT GACGGACACC
GACAGCGCGG TCGCCGCGCG TGACGTGTCG GAGGAGTACG CACGTGGGGC CGACGGCGCG
GATTCCGATG CCTCTTCCGT CGGCGATGGC GGAGGTTCGG ACCAGGTGAC GCCGGACCGC
AGCGACGGCA CCGACACCGC CGATTCTCCG GCGCTACAGT CCGATGCGAG CCCGACGACG
GCAGTCGCAG CCTGA
 
Protein sequence
MSSSHRRPAA RTPGACTCVA AAGAGLVGAF LLAGPASGLL AQAAAKTIVV VGGANDPTGK 
DQWARIGRDH SGTPPVFVPY SAQFGIGWPG LALSQDRRTT YAQSVDEGAN ATVKAVEAAA
AHDDEVVVYT ISQGADVVGL AVIRYGKDHP APSGGGGPRL TFVEQGGPSF IRTGMWNVIP
AGVPGLHTGP IRNDGASGAT VVGICIKGDI ACGVGNPVSS VFYAFPGFML HGSGYTAEYI
GRYSPVHGGE PYTPGSQGEV PVRVETVRRD GRTVTESIYA DGSSKRSWTE DGTTWVVIDT
GENPWMRLLR STGTPVPTSL DAVLNRVIPV PEPGAVNPWL PPEEPVRAVP AAAQHVPSTL
RHGMDRSDAL PVADLLRRSN AGGAERPAAE PPRADPVTDT DSAVAARDVS EEYARGADGA
DSDASSVGDG GGSDQVTPDR SDGTDTADSP ALQSDASPTT AVAA