Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2148 |
Symbol | |
ID | 9156304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2242280 |
End bp | 2244169 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003647098 |
Protein GI | 296139855 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGGCG CGATGACCGA CGATGCGGCG CCGTCGGCCG CGAGCGACGT TCCCGCCCCC AACACCCCGA CCAAGGGCGC CGCGCAGTAC CGCTTCGCCC GAGCACTGAT CCGGGCCCGG CTCCGGGTGG TCCGTGCGAC CCGCGACCCG GACCGGTTCC TGCGGGAGAA CTTCGACGAC TTCGCCGCCC GGCATCCGCT CCTCGCCTGG GCGTGGGGTC TGCTGCACCT CGATTTCGCC GGGCTGTTCG TGGGCGGGCT GTTCCTGATG AGCAGTTTCA CGGTCTCTCT CGTGCCGCGC TCGTGGTTCT TCCAGGGCAT CGTGGCGGGC ATCAATGCGG TGATCGGCTA CGGCATCGGG GTGCTGCTCA AATGGATCGT CGTGGACCTG CTGGTGCGCG CGCACCCGAT CAGGGATGAC CCGAAACGTG CCCGGCTCGT CCCGGTGTGG CGGGCACTCA TCGTGCTCGG TGTGCTGATC GGCGGCCTCA CCATGCTGGT GGTGTCCAAG CGCTGGCAGG ACGACGTGCG CGCACTCATG GGGATGCCTC CGGGATCGAA CCTCTGGTAC GTCCTCACTC CGATCGTCGC CTTCGTGGTG TCGGCTGTCT TGATCTCGCT GGTCCGTGTG CTCCGCGACC TCGGCCTGTA TCTCGCGCGC CGTGCCAACC GATATCTGCG TATTCCTCAA CCCGCCGCGC AGGTCCTGGG GTTCGCGGTG GTGGTGATCC TGGTCGTCAT CGCCGTCAAC GATGTGGGCG TGCGCGGATT CACCGCGGGG GCGAACAGGC TGGCATCGGC ATCGAACGAC GAAGAGGCGT CCGGATTCCC GCAACCCGTC GAGCCGGAGC GATCGGGATC GCCCCGCTCG CATGCCGAGT GGAAGGGCCT CGGCAAGGAG GGGCGCAAGT TCGTGGCCGG CGGGCTGGAC GCCGCCGACC TCGCCCGGTT CACCACGGCG CCCGTCACCG AGCCGGTGCG CGTCTACGTC GGGTTGGAGA ACGCGAAGAC ACCCGAGAGC CGGATCGCGC TATTGCACCG GGAACTGGAC CGCACGCGTG CACTCGACCG CAAGTACGTC GTGGTCATCC CGACCACGGG ATCGGGCTGG GTCAACCCGA CTGCCGCCCG CGCGGTCGAA CTCATGTACG GCGGCGATGT GGCACTGATC GCCATGCAGT ACTCGTACCT GCCCAGCTGG ATCTCCTTCC TCACCGATGG CGAGGCCTCC CTGCGGTCCG GTCAGCGCCT GATCGATGCC GTTGTCGGGG ACGTTCGCGC CCGGCCCGTG GAGACCAGGC CGAAGGTGCT GGTGATGGGC GAGAGCCTGG GCACCCGCGC CGGCGAGGGC GCCTTCGATT CGCTCACCGA CATCCGGGAC AAGGTCGACG GTGTGGTGTG GCTCGGTCCG CCCCGGGCCA ACCCGATTCA CTCCGCGGTC ACCCAGCGGC GCGATCTCGG AACCCCCGAA GTGCTGCCTT CGTACACCGA CGGACTCATC GTCCGGTTCA CCGACGGTGT GGTCCCACTG TCGGAGAACG GCGGCGCCGA ATGGTTGGCG CCGCACATCG TGTACGTGCA ACATCCGTCC GATCCGGTGG TCTGGTGGTC GACCGATCTG ATTTTCCGGC AACCGGATTG GTTGCGCGAG CCGGCGGGGC GCGACCGCAG TTCGGCGATG GCCTGGTATC CGTTCGTCAC CTTCTGGCAG GTTTCGGCCG ACCTCGCGAA CGCCGCCGGC GTCCCGGACG GCCACGGCCA CAATTACGGC ACCGCGGTCG TCGACGCCTT CGCCGCGGTC ATGCCGCCGC CCGGTTGGAC GCCCGCGGAT ACCGAGCGGG TACGCATGGC CGTCATGGCC AGCGCTGCGA TCGACGGTGC CGAGAAGTGA
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Protein sequence | MKGAMTDDAA PSAASDVPAP NTPTKGAAQY RFARALIRAR LRVVRATRDP DRFLRENFDD FAARHPLLAW AWGLLHLDFA GLFVGGLFLM SSFTVSLVPR SWFFQGIVAG INAVIGYGIG VLLKWIVVDL LVRAHPIRDD PKRARLVPVW RALIVLGVLI GGLTMLVVSK RWQDDVRALM GMPPGSNLWY VLTPIVAFVV SAVLISLVRV LRDLGLYLAR RANRYLRIPQ PAAQVLGFAV VVILVVIAVN DVGVRGFTAG ANRLASASND EEASGFPQPV EPERSGSPRS HAEWKGLGKE GRKFVAGGLD AADLARFTTA PVTEPVRVYV GLENAKTPES RIALLHRELD RTRALDRKYV VVIPTTGSGW VNPTAARAVE LMYGGDVALI AMQYSYLPSW ISFLTDGEAS LRSGQRLIDA VVGDVRARPV ETRPKVLVMG ESLGTRAGEG AFDSLTDIRD KVDGVVWLGP PRANPIHSAV TQRRDLGTPE VLPSYTDGLI VRFTDGVVPL SENGGAEWLA PHIVYVQHPS DPVVWWSTDL IFRQPDWLRE PAGRDRSSAM AWYPFVTFWQ VSADLANAAG VPDGHGHNYG TAVVDAFAAV MPPPGWTPAD TERVRMAVMA SAAIDGAEK
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