| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2112 |
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| Symbol | |
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| ID | 9156267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2202334 |
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| End bp | 2204844 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003647062 |
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| Protein GI | 296139819 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACG ATGGGCTCGC GGCCCTCCTC ACCGACGATC TCTATCGCAC GTTCATCGAG
CGCTCGCACG ACAGCTTCTA CATCCATGAC GTCGAGGGCC GGCTGGTGGC GGTGAACCCG
CAGACCTGTG TGAGCACGGG GTACAGCCGC GAAGAGTTGT TGCAGATGAA TGCGCTCGAC
ATCGTCCAGA TGACCGCGGA GGCGGCACGC ATCGGGTGGG CCGAGGCTTT CGCCGGGCGG
ACCGTCCTGG TGCCGGCGAT GCATCGGCGC AAGGACGGCA GCACCTTCCC GGTCGAGGCA
CTCTTGTCCA GCCATCTGAT CGGCGACCAG CGCTACATCG TGGGCCTCAG TCGCGACATC
TCCGAGCGGG TCGCTTCCGA CCGGGCGAAG CGGGAGGCGG CAGCGCGCCT GCAGGAGCGG
GTCGAGGAGA CGAAGACGTC GTCGCAGCGG ACGGCGGACC TGCTCCAGGC CGTGATCGAT
GCGGCACCCG ACCTGGTCTA CATCAAAGAC CGGGCGGGCC GCTACCAGTA CATCAATGCC
GCGGTCGCCA AGCTCTCCGG CGTCGCACCG GAGGACGCGG TCGGCAAGGA CGACACCGTG
CTCTTTCCCG GCCCTCTCGC CGAGACGTTG ATGGCGACGG ACCGGCGGAT CATGGAGACC
GGCGTCGGCC GTGAGGTCGA GGAATACCCG GTAGTGGACG GCGTCAAGCG CACGTATCTG
TCGAACAAGT CCGCCCACCG GGACGCCGAC GGGAATGTGA TCGGGTTGAT CGGCATCTCC
CGGGACGTCA CGGCGAGCCG TAGCGATGAG GAGCGCCTGC GGCGCAGCGA GGCCCGTTGG
CAATTCGCGA TCGACGGTGC CGGCGACGGC ATCTGGGACT GGGATCCGTT GTCGGACCGC
ATCTTCTACT CCCGGCAGTG GAAGCAGATG CTCGGGTACG AGGACGACGA GATCGAGGAC
TCCGTCGAAG CCTGGGCCGC GCTGGTGCAT CCGGACGATT TCGAACGATG CTGGGAGGCC
GTGCACCGGG TCGCGCGCGG CGAGGCCACC GAGTACAAAC TCGAGCTCCG GCTGCTGACC
AAGAGCGGTG AATGGCGGTG GATCTACGAC CGCGGCCGGG CGATGGAATG GGACGACGAT
GGACGGCCCA CGCGCATCAT CGGTACCCAT TCCGATATCA CCGAGCGGCA TACGCACGAG
CGCGAGATCC GCGAGCTGAC GCACCGGCTG CAGTGGCGCG CCGATCACGA TGACCTGACC
GAACTGCTGG GACGGACCAC TTTCGTCGAA CGCGCCACGC GCGTGGTCGA AGAGCGCCGT
GCCGACGGCG CCGAGTTGGC CGTACTGTGG GTCGACCTCG ACTCCTTCAA GCGCATCAAC
GACTCGCTCG GCCATAAAGT GGGCGATCTG GTGCTGCGCG TCGCGGCGCA GCGACTGATC
GCGGCATGTG CCCCGGACGA TCTGGTCGGG CGCCTCGGCG GCGACGAGTT CATCGCGCTG
CGGCCCCGCG TGTTGCCGAA CGACGATGTG CTCGCTTGGA CCGAGCGCGT CCGCCTCGCG
CTGGCCCGCC CGATGGAAGT GGATGGGATT TCACTGACAG TGACCTGCTC GATCGGGCTG
GTCGAATCCA CCGCACAGGA CGACATCGGC CAGTTGCTGA TCGACGGCGA TCTGGCACTC
CTGCACGCCA AACGGTCGGG ACGCAACCGT GTGGTCCGGC ACAGCTCGAC GTTGCGCGCC
AGCCAGCAGG AGCGGGTCGA TCTCGCGACG CACATCCGCG CCAAGATCGA CTCCGGCGAC
ATCGTGGTCC GATACCAGCC GGTGGTGGAC TTCACCACCG GTGAGATGGT GGGTGCCGAG
GCGCTGACCC GGATCGCCGG TCCCAATGGC ATCGAGCTCA GCCCCGGGGA GTTTCTACCG
CACCTCGAGA CCCTTGGACT GATGACCTCA TTGGCCGCCC TCGTCCTGCA CCGTGCGTGC
GCGGATTTCG CCTCCGCTCC GGAATTGGGG TGGGTGTCGG TGAACCTCGC CTCGGAGGAC
CTACTGGTTC CCTACCTCCC CGCCACACTG GGCCGGACGC TCGACGTGAC CGCCCTCGAT
CCCGCGCGAC TGATCCTCGA AATCAACGAG CGTGTCGTGC CCGAGCCGCA CATCCTGGCG
GCCACCCGGC GGTTGTCCGA GCTCGGCCCG CGCATCGCGC TCGACGACTT CGGTACGGGC
TGGTCCAGCA TGGCTCAACT CAAAGACCTC GACCTCGCGT TGGTGAAGAT CGATCGATCG
GTCGTCACGG CCTCCACCAC GCACGACGAT CCCCAATTGG AGGCGATGCT CACGGCGGCG
ATCGCCATGG CGCGAGCCCT GAACCTCGAT GTGATCGCCG AAGGTATCGA ACGGGTGGAG
GAGGCTCGGG CCCTGGCCGC CGCCGGTGCC CGGGTCGGGC AGGGGTTCCT GTGGAGCCCC
GCCATTGATT TCGCGGCGCT CCGGACCTGG TCTCCGGAGC CCGCTTCCTG A
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| Protein sequence | MNHDGLAALL TDDLYRTFIE RSHDSFYIHD VEGRLVAVNP QTCVSTGYSR EELLQMNALD
IVQMTAEAAR IGWAEAFAGR TVLVPAMHRR KDGSTFPVEA LLSSHLIGDQ RYIVGLSRDI
SERVASDRAK REAAARLQER VEETKTSSQR TADLLQAVID AAPDLVYIKD RAGRYQYINA
AVAKLSGVAP EDAVGKDDTV LFPGPLAETL MATDRRIMET GVGREVEEYP VVDGVKRTYL
SNKSAHRDAD GNVIGLIGIS RDVTASRSDE ERLRRSEARW QFAIDGAGDG IWDWDPLSDR
IFYSRQWKQM LGYEDDEIED SVEAWAALVH PDDFERCWEA VHRVARGEAT EYKLELRLLT
KSGEWRWIYD RGRAMEWDDD GRPTRIIGTH SDITERHTHE REIRELTHRL QWRADHDDLT
ELLGRTTFVE RATRVVEERR ADGAELAVLW VDLDSFKRIN DSLGHKVGDL VLRVAAQRLI
AACAPDDLVG RLGGDEFIAL RPRVLPNDDV LAWTERVRLA LARPMEVDGI SLTVTCSIGL
VESTAQDDIG QLLIDGDLAL LHAKRSGRNR VVRHSSTLRA SQQERVDLAT HIRAKIDSGD
IVVRYQPVVD FTTGEMVGAE ALTRIAGPNG IELSPGEFLP HLETLGLMTS LAALVLHRAC
ADFASAPELG WVSVNLASED LLVPYLPATL GRTLDVTALD PARLILEINE RVVPEPHILA
ATRRLSELGP RIALDDFGTG WSSMAQLKDL DLALVKIDRS VVTASTTHDD PQLEAMLTAA
IAMARALNLD VIAEGIERVE EARALAAAGA RVGQGFLWSP AIDFAALRTW SPEPAS
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