Gene Tpau_2063 details

Gene Information

• Locus tag: Tpau_2063
• ID: 9156218
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2148980
• End bp: 2149747
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 73%
• Product: LmbE family protein
• Protein accession: YP_003647014
• Protein GI: 296139771

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.621091
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTCGG TCGTCGCGCT CAACGCCCAC CCGGACGATG AGACGATCCT CGAAGGCGGC 
ACGCTCGCCG CGCTCGCAGC CGCGGGCCAC CGGGTGATAT TGGTGGTCGC CACCGACGGA 
CTGGTGCACG ACGAACCCGA ACCCCGTCGG CGGCTCGACG AGTTGGAGGC CGCCGCGGCC 
GCACTGGGCG TCGACGACGT CCGCTGGCTC GGCTACGCCG ACAGTGGACA CGGCGCGGAG 
CTGTATCCCG ATCCGCCGGG GCGGGTGCGA CTGGTGCGCG CCGGTGTCGA CCAGCCCGCC 
GAGCAGGTGG CCGAGATCCT GCGCGAGGTG GCCGCCGACC TGCTGATCGG CTACGACGCC 
GCCGGCGGCT ACGGGCATCG CGACCACCTG GCGGTGCACG CGATCGGCCA GCGGGCGGCC 
GAACTCGCGG GGGTGCGTCT GGTCGAGGCG ACAGCGCCCC GCGAAGTGCC GGTGCGCCTG 
TTCACCGTCG CGTCCCGTCT CCACCTGGTC TCCGCGTCGG ATGTGGGCCG TGCGCGCACC 
TGGTTCACCC CATCGGCACG GATCACACAC AGGATCGATG TGCGCGGGCA CATCGCGGCG 
AAGCAGCGGG CGCTCGCCGC GCACCGGACC GAGCTGGAGA AGCCGGGTCC CGTGGCGCGG 
ATTCAGCGGC TGATCGTCCG CCTCCCACCA CGGCTGCTGG TCCCGCTGTT CGGCACAGAG 
TTCTTCATCG AGCCCGGCGT CGCGGGCCGC CATCGGCGCC TGCTGTGA 

 

Protein sequence

MASVVALNAH PDDETILEGG TLAALAAAGH RVILVVATDG LVHDEPEPRR RLDELEAAAA 
ALGVDDVRWL GYADSGHGAE LYPDPPGRVR LVRAGVDQPA EQVAEILREV AADLLIGYDA 
AGGYGHRDHL AVHAIGQRAA ELAGVRLVEA TAPREVPVRL FTVASRLHLV SASDVGRART 
WFTPSARITH RIDVRGHIAA KQRALAAHRT ELEKPGPVAR IQRLIVRLPP RLLVPLFGTE 
FFIEPGVAGR HRRLL