Gene Tpau_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1970 
Symbol 
ID9156125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2058016 
End bp2059035 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content73% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003646921 
Protein GI296139678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.373061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACCTG CCCTCGTGGA AACGCTGATC GTGGCTCGCC GCGGTCGCGG ACGCACGGCC 
GGCCGGCTGC TCCTGGTGCG CGTGGCGATC GCGTTCCCGG TCCTGCTGGT GGTCTCGCTC
GCCCTGTTCG CGCTGGCCGG CCTATCTCCG TTCGATCCCC TCGCCACCTA CCTCGGGGGC
GAGTACCAGT CCGCTTCCCA AGCCCAGCGC GAGGCCGCGC AGGTGGCCTA CGGTCTCGAC
GCGAGCTGGT GGTCGGCGTG GTGGCGCTGG GCCTGCGCGC TGCTGTCCGG CGATCTCGGC
TTCTCCTCGA CGAAGGGGCG TCCGGTCGCC GAGGTTCTCG CGCAAGGACT TCCCTTCACC
ATCGGGTTGT CGGCGACCGC GCTGCTGATC GCCGCCGCTG CGGCGATCAC GCTCGGCGCC
GTGGCCGGGA TGCGCAGCGG CAGCCGGCTC GATAAGACGG TGAGCGCACT GGCCACGGCG
CTGGCGGCGA CCCCGCCGTT CGTGGTCTCC CTGCTGCTGG TCGCGGTGTT CGCGGTGGGG
CTACGGGCCT TGCCGACCTC GGGAGCGCGC GCACCGGGCG AGCCGTACAC GCTGGGCGGC
ATCGTCTCCC ACGCGGCACT GCCCGTGACG GCGTTGGCGC TGTCACAGAT GCCCTGGCTG
TTGCTGTCGA TGCGGTCCGC CGTCGTCGAC GCCGCCCGGT CCGATGCGGT GCGCGGAGCG
CGGGCCCGCG GGATCAGCGG GGCGACCCTG CTGCGCGGCC ACATCGGCCC GATGTCGGTG
CTGCCGACAC TGGCCCTGCT CGGCACCCGG CTGCCGGAGG TGATCGCCGG TGCGACCATC
GTGGAGACGG TCTTCGGCTG GCCGGGAATA GCCTCCGCCC TCGTGGATTC GGCGACGGCA
CTGGACTTTC CCCTGTTCGC ATCGCTGTCG CTGCTCGCCG CGGCGGCAGT GCTCGCCGGA
TCGGCGCTCG CCGATGCGGC GGCGGTGTGG CTGGACCCCC GGATCGAGTT GGCCGGATGA
 
Protein sequence
MEPALVETLI VARRGRGRTA GRLLLVRVAI AFPVLLVVSL ALFALAGLSP FDPLATYLGG 
EYQSASQAQR EAAQVAYGLD ASWWSAWWRW ACALLSGDLG FSSTKGRPVA EVLAQGLPFT
IGLSATALLI AAAAAITLGA VAGMRSGSRL DKTVSALATA LAATPPFVVS LLLVAVFAVG
LRALPTSGAR APGEPYTLGG IVSHAALPVT ALALSQMPWL LLSMRSAVVD AARSDAVRGA
RARGISGATL LRGHIGPMSV LPTLALLGTR LPEVIAGATI VETVFGWPGI ASALVDSATA
LDFPLFASLS LLAAAAVLAG SALADAAAVW LDPRIELAG