Gene Tpau_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1967 
Symbol 
ID9156122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2055832 
End bp2056494 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003646918 
Protein GI296139675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.234063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGA TCATCGGCAC GGGCATCGTG GTTCGCCGCC GCGGCCGTCC GGTGCTCGAC 
GGGGTGAACG TGACGGTGCA CGCGGGCGCG GTGACCGGTG TGCTCGGCCC GTCGGGCGCG 
GGCAAGACGA CACTGCTGCG GGTACTCGCC GGACTGCTCT CACCCGATGC CGGTTCCGTC 
GACCACGGCG GGGGTGCGCC GCGCCCGGCG GCGGGGACGC TCGCGATGCT GGCGCAGCAT 
CCACGGACCG TGTGCAATCC GCGGTGGCCG CTCGCGCGGA TCGTCGGCGA GCCCCGTCGC 
ATCAGTGGCG TCGGCATCGG GGTCGACGAG GCCGCGGACC GCGCAGGGCT GCAGCCATCG 
CTGCTGGATC GGTTCCCGGC GCAGGTGAGC GACGGACAGC TCCAACGTGC CTGTGTGGCA 
CGGATTCTGG TGCAGGCGCC GCGGTTCCTG CTCGCCGATG AGCCGGTGGC GATGCTCGAC 
CCCGTTTCGG CGCGCGCGGT GCTCCGGATA CTCGACGCCG TGACCGCGGC GGGCACGGGG 
GTGGTCCTGG TGAGCCATAA CGCAGCGCTG GTGCGGCGGC GAGCGGCGAC GGTGATCGAG 
CTTCAGTCGA GCGGTGCGAC GTCGACCGAG ACGTCGATCG AGGATCCCCG CGAATCCGTG 
TAG
 
Protein sequence
MTAIIGTGIV VRRRGRPVLD GVNVTVHAGA VTGVLGPSGA GKTTLLRVLA GLLSPDAGSV 
DHGGGAPRPA AGTLAMLAQH PRTVCNPRWP LARIVGEPRR ISGVGIGVDE AADRAGLQPS 
LLDRFPAQVS DGQLQRACVA RILVQAPRFL LADEPVAMLD PVSARAVLRI LDAVTAAGTG 
VVLVSHNAAL VRRRAATVIE LQSSGATSTE TSIEDPRESV