Gene Tpau_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1952 
Symbol 
ID9156107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2038793 
End bp2039827 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRadical SAM domain protein 
Protein accessionYP_003646903 
Protein GI296139660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGATGGG AAGGCCAATT ACTGACGGAC GAGCCCGGCT CCGGCGTGCG CGCTCTGCCG 
GGGCTCGAAG GGATCGGACG GGCGGTCACC ACCCCGGATT TCGAGGGGAT CACCTTCCAT
GAGGTGCTGT GTAAGAGTGC GCTCAACCGG GTGCCGGAAT CGGCGGCGCT GCCGTTCGAA
TGGACGATCA ACCCGTATCG CGGATGTACC CATGCGTGCA CCTACTGCTT CGCTCGCTCA
AGCCACGAGT ACCTCGACTT CGACGCCGGG GGAGATTTCG ACACCCAGAT CGTGGTGAAG
ACGAACCTGG TCTCGGTGCT CAAGAAGGAG CTGCGCCGCG CGTCCTGGCG CGGCGAGGCG
GTGGCGCTCG GGACCAACAC CGATCCCTAT CAGCGTGCGG AGGGGCGGTA TCGGCTGATG
CCCGGCGTGA TCGGTGCCCT TGCGGGTGCG GGTTCGCCGA TTTCGATCCT CACCAAGGGC
ACACTGCTGC AACGCGATCT GCCGTTGCTC GCCACCGCCG CCACCACGGT GCCGGTGCGC
CTGTCGGTCT CGCTCGCCCT GCTCGATCCG GCATTGCAGG CCTCGCTCGA ACCGGGAACT
CCGAAGCCTG CCGCTCGGCT CGGTCTGATC CGGGCGATCG CCGACGCGGG CTTTGACTGC
AATGTGATGG TGGCACCCGT GATCCCGTAT CTCACGGACG ATTCCGCGTC GCTGCGGGCG
TTGTTCGAGG CGCTGGCCGG GGCAGGCGCG GCGAGCGCCA CGGTGATGGC GCTCAATCTC
ACCGGCCGCT ACCGGGACTG GTTCCTCAGC TGGCTGGCGC AGAATCACCC GGCGCTGGTG
CGCCGGTACC GGCAACTCTA CGGCTCTACC GGGCGGGTGT CGGCCGAGTA CCGGGCGCAC
CTGCGGTCGC GGACGGAGCC GCTGATGAAG GAGTTCGGCC TCTCGATCCG CGAAGAGTAT
TCGGCGCCGG ATCGGCGCCC GGTGCGCAGG CCCACGGGAT CGGTCGCGCC GGACTTGCAG
GAGCCCCTGT TCTAG
 
Protein sequence
MRWEGQLLTD EPGSGVRALP GLEGIGRAVT TPDFEGITFH EVLCKSALNR VPESAALPFE 
WTINPYRGCT HACTYCFARS SHEYLDFDAG GDFDTQIVVK TNLVSVLKKE LRRASWRGEA
VALGTNTDPY QRAEGRYRLM PGVIGALAGA GSPISILTKG TLLQRDLPLL ATAATTVPVR
LSVSLALLDP ALQASLEPGT PKPAARLGLI RAIADAGFDC NVMVAPVIPY LTDDSASLRA
LFEALAGAGA ASATVMALNL TGRYRDWFLS WLAQNHPALV RRYRQLYGST GRVSAEYRAH
LRSRTEPLMK EFGLSIREEY SAPDRRPVRR PTGSVAPDLQ EPLF