Gene Tpau_1887 details

Gene Information

• Locus tag: Tpau_1887
• ID: 9156037
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1972336
• End bp: 1972983
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 67%
• Product: integral membrane alanine and leucine rich protein
• Protein accession: YP_003646839
• Protein GI: 296139596

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.256495
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCGGAG CGGACGCGGC CGAGCCGTCG ATCCGGGACC AGGTGCTCGA TCAGATGGGC 
GGTTGGCAGG GCCTGGTGTA TTCGGCGCTC CCGGTCGCTG CGTTCGTCCC GGCCAATGCC 
GTCTGGGGCC TGAAGGGCGG CGTGATCACC GCGCTCGTCG TGGCCGCGAT CGTCATGGTC 
ATCCGGCTCG CCACTCGGAC CTCGATCCAG CCCGCGATCT CCGGATTCTT CGGCGTGGCG 
GTGTGCGTGG TCATCGCCCT GATCGTCGGC GGTAACGGTA AGGGCTACTA CCTCTACGGC 
ATCGTGATGC AAGCCGTGCT CGCCGTGGTG TTCGCGATCT CGATCATCGT GCGGTGGCCG 
CTGGTCGGGG TGCTGTGGCA CCTGTTCGAC GAGCGGTCGA AGCAGGCGGT CGACGACGGG 
CACGATTGGC GGGCCGACCG CCGCCAGTAC CGCGGCTTCG TCTGGCTCAC CGTGATGTGG 
TTCGCCATGT TCACCGTCCG CTTCGTGGTG CAGCTCGCGC TGTACCTGGG CGACGACGTG 
AACTGGCTCG GCGTGGCCCG GATCGCCATG GGCTGGCCGA TGTTCGCCGC CGGACTGCTG 
ATCACCTTCC TCGTGGCCCG GAAACTCACG CATGCTGACG ACGAATGA 

 

Protein sequence

MSGADAAEPS IRDQVLDQMG GWQGLVYSAL PVAAFVPANA VWGLKGGVIT ALVVAAIVMV 
IRLATRTSIQ PAISGFFGVA VCVVIALIVG GNGKGYYLYG IVMQAVLAVV FAISIIVRWP 
LVGVLWHLFD ERSKQAVDDG HDWRADRRQY RGFVWLTVMW FAMFTVRFVV QLALYLGDDV 
NWLGVARIAM GWPMFAAGLL ITFLVARKLT HADDE