Gene Tpau_1881 details

Gene Information

• Locus tag: Tpau_1881
• ID: 9156031
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 1968413
• End bp: 1969117
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 72%
• Product: secreted alanine rich protein
• Protein accession: YP_003646833
• Protein GI: 296139590

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.961705
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTTTCCC AGCTCACCGG CGCCGGCCGC CGATTCGACC GCAAGGGCGA GCCGTTCCGG 
CGCAGGAGCG CGCTACCCCT CCTCATCGTG ATCGCGGTGC TCGCCGTCGT CGCCATCGGC 
ACGTGGGCGC GAGCGTTGTC CTCCGAGGAG ACCACCGCGG CCCCGGTCTC GTGCCCGGCA 
CCCGCACCCG CGGCGGCCCC CTCCTCCGGA AAACCCGCCA CCAGCTCAGC GGCTCCGGTT 
CCGGCTCGGT TCGAGGTGGT CTCCCCCGAC GACATGATCA GTGTGCGGCC CGCCCCGCTC 
GCGGCGACCG TGGTGCGGGT CCTCAACGCC TCGGGCCAGT CGGGCCGGGC CGAGACCACG 
CTCAACAAGC TCACCGATTA CGGCTTCGCC GCGCCCCCGA CGGGCGCGTA CGGCAACGAC 
AGCTTGTACA AGCAGATGGA TTGCCAGGCG CAGTTGAGGT TCGGCGACGC CGGTCGTGCG 
GCCGCGGCGG CCGCTTGGGT GATCGCGCCC TGTGCCGAGC TGGTCAACGA CGGCCGCCGG 
GACGCCACCG TCGATCTGTC ATTGGGCACC TTCTTCACCG ACCTCGAACC CAGCACCGAC 
GCGCAGGAGG TCCTGCGCAT CCTGCGGGCA GCACCCGCGG GAGCGACCGA CGGCGGAGCG 
AACCCGGCGC TGGTGGCCGC CGTCCATCAG AACGCGTGTA ACTGA 

 

Protein sequence

MVSQLTGAGR RFDRKGEPFR RRSALPLLIV IAVLAVVAIG TWARALSSEE TTAAPVSCPA 
PAPAAAPSSG KPATSSAAPV PARFEVVSPD DMISVRPAPL AATVVRVLNA SGQSGRAETT 
LNKLTDYGFA APPTGAYGND SLYKQMDCQA QLRFGDAGRA AAAAAWVIAP CAELVNDGRR 
DATVDLSLGT FFTDLEPSTD AQEVLRILRA APAGATDGGA NPALVAAVHQ NACN