Gene Tpau_1857 details

Gene Information

• Locus tag: Tpau_1857
• ID: 9156007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1940727
• End bp: 1941482
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 66%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003646810
• Protein GI: 296139567

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACCC AACGTGTTGC CATCGTGACC GGTGCCGCCC GCGGCATCGG CGCCGAAGTC 
GCCCGCCGGC TCGCCTCCGA CGGCCACAAG GTGGCCGTCC TCGATCTCGA CGAAACCGCC 
TGCGCAGCCG TCGCGCAAGA GATCGTCGCC GCGGGTGGCC AGGCTATCGG CGTCGGCGTC 
GACGTCGCCG ACGAAGAGAA GGTGGCGACC GCAGTCGGCC GTGTCGCCGA AGAACTGGGC 
GCTCCCACGA TCCTGGTCAA CAACGCCGGC ATCCTTCGCG ACAACCTGCT GTTCAAAATG 
TCGCTCTCCG ACTGGGACCA GGTGATGGCC GTGCATCTGC GCGGCGCATT CCTGATGTCG 
CGCGAGGTGC AGAAGTACCA GACCAAGGAG GGGTGGGGCC GGATCATCAA CCTCTCCTCC 
ACGTCTGCCC TCGGCAACCG CGGGCAGGCG AACTACTCGG CAGCGAAGGC CGGTATGCAG 
GGCTTCACCA AGACCCTCGC GTTCGAGCTC GGCAAGTTCG GCGTGACCGC GAACGCGATC 
GCACCGGGCT TCATCGCCAC CGATATGACC GCCGCGACGG CTGAGCGGAT CGGTGTCCCT 
TTCGAGGACT TCAAAGCCGC AGCCGCCAAG GAGATCCCGG TACAGCGAGT GGGAGCACCG 
TCCGATATCG CGCACACCGC CAGCTTCTTC GCCAGTGAGG GAGCGGGTTT CGTCTCCGGG 
CAGGTCATCT ACGTGGCCGG TGGGCCCAAG GACTGA 

 

Protein sequence

MTTQRVAIVT GAARGIGAEV ARRLASDGHK VAVLDLDETA CAAVAQEIVA AGGQAIGVGV 
DVADEEKVAT AVGRVAEELG APTILVNNAG ILRDNLLFKM SLSDWDQVMA VHLRGAFLMS 
REVQKYQTKE GWGRIINLSS TSALGNRGQA NYSAAKAGMQ GFTKTLAFEL GKFGVTANAI 
APGFIATDMT AATAERIGVP FEDFKAAAAK EIPVQRVGAP SDIAHTASFF ASEGAGFVSG 
QVIYVAGGPK D