Gene Tpau_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1812 
Symbol 
ID9155962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1893209 
End bp1894462 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content69% 
IMG OID 
Productaminotransferase class-III 
Protein accessionYP_003646769 
Protein GI296139526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAC AGGGATCCAC GCGACCATCG GCACTCTGGC ACGGCTTCGC AGACATGGGC 
GCAGTGCAAC GCGACGGCGC GTTCGTCTTC GCCCGTGGCG ACGGTGCGTA CGTCTACGAC
ACCACTGGCA ACCGCTATCT CGATGCCACC GCCGGCCTGT GGTTCGCCAA CGTCGGCCAC
GGCCGGGCGG AGGTCGCCGA TGCCGTGCGC GACCAGTTGC TCAAGGTGGC GCACGTGACC
GGCTTCGGTG ACGCCGCCAC CGATACGACG GTGGCTCTCG CCGAGCGGCT GCGGGATATC
GCGCCGGTCC CGGACAGCAA GATCTTCTTC ACCTCCGGCG GCTCCGATTC CGTCGACTCC
GCCATCAAGC TGGCCCGGCG GTACTGGCAG GAGAAGGGCA AGCCCACCAA GAAGCTGATC
GTCGGCCGGT CCAACGCCTA CCACGGCATG CACGTGGGCG GCACCAGCCT CGGCGGCATC
CCCGTGAACG CCGAGGGATA CGGCGGCGTC CTGTTCGACG ACACCGCGAC CGTGGCCTGG
GACGATGCCA AGGAGCTGCT CGGACTCATC GAGCGCGTCG GCGCCGACGC CATCGCCGCC
TTCGTCGCCG AGCCCGTGAT CGGCGCCGGG GGCCTGCTGC CGCCGCCCGA CGGCTACCTG
CGTGAGGTGC GCGAGATCTG CCGCGAACAC GACGTGCTGT TCATCGCCGA CGAGGTGATC
ACCGGTTTCG GCCGGATCGG CGGTGCCTGG TTCGCCTCCA GCCGGTTCGA CCTGCAGCCC
GATCTGATGA CCACCGCGAA GGGGCTCACC AGCGGATACG TACCGATGGG CGCACTGTTC
GTGGCGCCGA ACGTCGCTGA GCCCTTCTTC GCGGGAGGAG TGTGGTGGCG CCACGGCTAC
ACCTACGGCG GCCACGCGGC GGCAGCCGCC GCGTCGATGG CGGTACTCGA CATCATGGAG
CGGGAGAATC TCGTCGCCGA AGCCCTGCGG TTGCAGGACA CACTGCTGCG GGAGCTGGCA
CCGCTGGCTG ATCACCCCAA GGTCAAGCAG GTCCGCGGCG GTGTCGGCGC GGTGGCCGGC
GTGCAGCTGA ACGAGCCCGC CGAGGCGATG GCGATGGTGA AGAAGCTACG CGCACAAGGT
GTCTCGGGTC GTGCCGCTGG GTTGGGCACG CTGCAGTACT CGCCGGCCTT GATCACCACC
GACGAGCAGG TGGCCGAGAT CGCGGCCGCC ACCCGCCGGG CGCTCGACGC CTGA
 
Protein sequence
MSGQGSTRPS ALWHGFADMG AVQRDGAFVF ARGDGAYVYD TTGNRYLDAT AGLWFANVGH 
GRAEVADAVR DQLLKVAHVT GFGDAATDTT VALAERLRDI APVPDSKIFF TSGGSDSVDS
AIKLARRYWQ EKGKPTKKLI VGRSNAYHGM HVGGTSLGGI PVNAEGYGGV LFDDTATVAW
DDAKELLGLI ERVGADAIAA FVAEPVIGAG GLLPPPDGYL REVREICREH DVLFIADEVI
TGFGRIGGAW FASSRFDLQP DLMTTAKGLT SGYVPMGALF VAPNVAEPFF AGGVWWRHGY
TYGGHAAAAA ASMAVLDIME RENLVAEALR LQDTLLRELA PLADHPKVKQ VRGGVGAVAG
VQLNEPAEAM AMVKKLRAQG VSGRAAGLGT LQYSPALITT DEQVAEIAAA TRRALDA