| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1700 |
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| Symbol | |
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| ID | 9155850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1770056 |
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| End bp | 1771912 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003646657 |
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| Protein GI | 296139414 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.808868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACC GGTACCCGTT CAGCGCCGTC GTCGGCCACG ACGAACTGCG TCTGGCCCTC
ACGCTCTGTG CGATCGCCCC CGCGGTCGGC GGCGTCCTCG TGCGTGGTGA GAAGGGCACG
GCGAAATCGA CTGCGGCACG GGCCTTGGCA CCATTGCTGC CGCCGCGGCC CGATGGTGCC
GACGCCCGGC TCGTCGAGTT GCCCATCGGT GCCACCGAGG ACCGCGTGGT CGGTTCGCTC
GACCTGCACC GAGCCCTTGG TGAGGGCGCG GTCGACTTCA CCCCGGGACT GTTGGCCGAC
GCCGACGGCG GCATTCTCTA CGTGGACGAG GTGAACCTGC TCTCGGACCA CCTCGTGGAC
GTGCTGCTCG ATGCCGCCGC GATGGGCCGG GTCACCGTGG AACGCGATGC CGTGTCCCGT
TCCTATCCGG CCCGATTCGT GTTGGTGGGC ACCATGAACC CCGAGGAGGG AGAGCTGCGG
CCGCAGCTGC TCGACCGATT CGGTCTCGCA GTCGACGTGC GTGCCAGCCG CGAGGTGGAC
GTCCGGGTCG AGGTGATGCG CCGACGTCTC GCCTTCGAGT CCGATCCCGC CGGATTCGCC
GCCGAGTACG CCGCCGCGGA CACCGCTCTC GCGGACCGGA TCGCCACGGC CCGCGAGCGG
CTCCCGCGGG TGACGCTGCC CGATGCCGAA CTGCGCCGCA TCGCCGCCGT GTGCGCCGCG
TTCGACGTGG ACGGAATGCG CGCCGATCTG GTGATCGCCC GGGCGGCGCT GGCACACGCC
GCCTGGCGCG GCGTCGACGA GGTGACCGAG GACGATGTCC GGGTGGCGGC CGCGCTCGCT
CTGCCGCACC GTAAGCGCCG CGATCCCTTC GACGAGCCCG GCCTCGACGA TCAGGAACTG
GACCGCGCCT TCGACGACGC CCGCCAGAAC GAGGACCCCG ACCCGGACAC CGACCCCGAT
GGCCCGGACG ACCCCGAAGG CGGCGGCGAA CCGTCGGATC CGACCCCGCC GCAACCGGAC
TCGGCTGGGG ACGATCGGCC CGGCACTCCG GAGGGCGGCA CGCTGCCCAC CGCACGACAC
CGCACCGTCG CCAAACTGAG CGTGCCCGGG CTCGGCACCG GCGGCGCCGC AGGGCGCCGC
TCCAAGGCCC GGTCCGACCG CGGCAGCGTG GTCCGGGCGG CGCCCGCGGG CACGGGCTCG
GGCCTGCACC TCGTGGCGAC GCTCCGCGCC GCGGCGCTGA ACCAGGGGAG CCGCGGTCGC
AGCAGCGGGC CGCTGCGCCT GGCGCGAGAA GACTTGCGCG CACCGATCCG GGAGGCCACC
GAGGGGAATC TGGTGGTCTT CGTCGTCGAT CTCTCCGGGT CCATGGCCGC TCGCGACCGG
CTCGCCCTGG TCGGCGAGGC GGCGGTCTCC TTGCTGCGCG ACGCCTACCA GCGGCGCGAC
AAGGTGGCCG TGATCGGGTT CCGCGGCACC GAGGCAACCC TGCTGGTGCC CCCCACCCGC
TCCGTCGACG TGGCCGTCGC CAGGCTCGCC CGCGCCCGCA CCGGCGGCCG CACCCCACTC
GCCGAGGGCA TCACCGAGGC CCGCCGACTG TTGCGCCGGG AGTCGCTGCG GCCCGATGCT
CGGCGCCCGC TCGTGGTGCT GCTCACCGAC GGACGTGCCA CCGCGGGGCG CGATCCGTTG
CCCCGCGCCG TGGCCGCCGC CGCGGGACTG CGCGCTGACG GTCATGCGAG CGTCGTGGTG
GACTGCGAGA CCTCGATGGT GCGACTCGGG CTCGCCGCCC GGGTGGCGAA CGCGCTGGGG
GCCGAACTGA TCCCGCTGGG TGGGCTGAGT CCCGCCGATC TGGCCCGCGT CGCCTGA
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| Protein sequence | MSDRYPFSAV VGHDELRLAL TLCAIAPAVG GVLVRGEKGT AKSTAARALA PLLPPRPDGA
DARLVELPIG ATEDRVVGSL DLHRALGEGA VDFTPGLLAD ADGGILYVDE VNLLSDHLVD
VLLDAAAMGR VTVERDAVSR SYPARFVLVG TMNPEEGELR PQLLDRFGLA VDVRASREVD
VRVEVMRRRL AFESDPAGFA AEYAAADTAL ADRIATARER LPRVTLPDAE LRRIAAVCAA
FDVDGMRADL VIARAALAHA AWRGVDEVTE DDVRVAAALA LPHRKRRDPF DEPGLDDQEL
DRAFDDARQN EDPDPDTDPD GPDDPEGGGE PSDPTPPQPD SAGDDRPGTP EGGTLPTARH
RTVAKLSVPG LGTGGAAGRR SKARSDRGSV VRAAPAGTGS GLHLVATLRA AALNQGSRGR
SSGPLRLARE DLRAPIREAT EGNLVVFVVD LSGSMAARDR LALVGEAAVS LLRDAYQRRD
KVAVIGFRGT EATLLVPPTR SVDVAVARLA RARTGGRTPL AEGITEARRL LRRESLRPDA
RRPLVVLLTD GRATAGRDPL PRAVAAAAGL RADGHASVVV DCETSMVRLG LAARVANALG
AELIPLGGLS PADLARVA
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